Gene Caci_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5127 
Symbol 
ID8336481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5885842 
End bp5887365 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content70% 
IMG OID644958225 
Productglycerol kinase 
Protein accessionYP_003115827 
Protein GI256394263 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGC ACTTCGTGAT GTCGATCGAC CAGGGCACGA CATCCACGCG CTGCATCCTG 
TTCGACCGCG GCGGCCGCCT GGTCTCGGTG TCCCAACGCG AGCACAAGCA GTACTTCCCC
AAGCCCGGCT GGGTCGAGCA CGACGCCGCC GAGATCTGGC GCAACCTGGA ACACCTGGCG
CCCGAGGCAC TGGCCAAGGT CGGGGTGACC ACCGGCCAGG TGGCCGCGAT CGGCATCGCC
AACCAGCGCG AGACCACGGT GCTGTGGGAC CGCCGGACCG GCCACCCGCT AGGCCGCGCG
ATCGTCTGGC AGGACACCCG CACCGACGAG CTGGTCGCCG AATACGCGCG CCGCCCGGAC
GCCTCGACAG TCCTGGAGCA CTCCGGTCTG CCGCTGGCCA CGTACTTCTC CGCGCCGCGC
ATCCGCTGGA TGCTGGACCA CAACCCGGGC CTGCGCGAGC GCGCCGAACG CGGCGAGGTG
CTGTTCGGCA CGATGGAGAG CTGGCTGATC TGGAACCTCA CCGGGGGGGT GGACGGCGGC
GTGCACGTCA CCGACGTCAC CAACGCCAGC CGCACCCAGC TGATGAATAT CAGGACTTTA
GAATGGGACC CGGAGCTGCT GGACTTCTTC GGCGTCCCGG CGGCGATGCT GCCGGAGATC
CGCTCCTCGG CGGAGGTCTA CGGTCAGGCG GCGCGCGCCC TGCCCGGCGT CCGGATCGCC
GCCGCGCTCG GGGACCAGCA GGCGGCGCTG TTCGGGCAGA CCTGCTTCGC CCGCGGCGAG
GCGAAGTGCA CGTATGGAAC CGGCAGCTTC CTGCTGCTGA ACACCGGCGA CACCCCGGTG
CGCTCCACGC ACGGACTGCT CACGACGGTC GGCTACCGCA TCGGCACGGA ACCGGCGGTC
TACGCCCTCG AAGGCTCGAT CGCCGTCACC GGCTCGCTGG TCCAGTGGTT CCGCGACAGC
CTCGGGCTGA TCACCACCGC CCCGGAGATC GAGACGCTGG CGCGCACGGT GGAGGACAAC
GGCGGCTGCT ACATCGTCCC GGCCTTCTCA GGACTGTTCG CTCCGCACTG GCGCAGCGAG
GCGCGCGGCG TCATCGTCGG GCTGACCTCC TACATCACCA AGGGACACCT GGCGCGTGCG
GTCCTGGAGG CGACCGGCTG GCAGACGCGC GAGGTCGTGG ACGCGATGAA CGCCGACTCG
GGTCTGGCGC TGACCACGCT CAAGGTCGAC GGCGGCATGA CGGCCGACAA CCTGCTGATG
CAGTTCGTCG CGGATGTCCT GGACGCCCCG GTGGTCCGCC CGATGGTCGC CGAGACGGTG
TCGCTGGGCG CCGCCTACGC CGCCGGCTTG GCTGTCGGCT ACTGGCCGGA CCTGGAAGGC
CTGCGCCGCA ACTGGCATCG CGCCGCTTTG TGGAACCCGG CGATGGACGC CGGACGACGG
GAGAGCGAGT ACGGGAACTG GCGGCGCGCG GTGGAGCGGA CCTTCGACTG GATACAGCCC
GCGGCGGAGG CTCGGGGCGA GTAG
 
Protein sequence
MVAHFVMSID QGTTSTRCIL FDRGGRLVSV SQREHKQYFP KPGWVEHDAA EIWRNLEHLA 
PEALAKVGVT TGQVAAIGIA NQRETTVLWD RRTGHPLGRA IVWQDTRTDE LVAEYARRPD
ASTVLEHSGL PLATYFSAPR IRWMLDHNPG LRERAERGEV LFGTMESWLI WNLTGGVDGG
VHVTDVTNAS RTQLMNIRTL EWDPELLDFF GVPAAMLPEI RSSAEVYGQA ARALPGVRIA
AALGDQQAAL FGQTCFARGE AKCTYGTGSF LLLNTGDTPV RSTHGLLTTV GYRIGTEPAV
YALEGSIAVT GSLVQWFRDS LGLITTAPEI ETLARTVEDN GGCYIVPAFS GLFAPHWRSE
ARGVIVGLTS YITKGHLARA VLEATGWQTR EVVDAMNADS GLALTTLKVD GGMTADNLLM
QFVADVLDAP VVRPMVAETV SLGAAYAAGL AVGYWPDLEG LRRNWHRAAL WNPAMDAGRR
ESEYGNWRRA VERTFDWIQP AAEARGE