| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5123 |
|---|
| Symbol | |
|---|
| ID | 8336477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 5880271 |
|---|
| End bp | 5882073 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644958221 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003115823 |
|---|
| Protein GI | 256394259 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAATCCA CACCCTTGGG CGCCCAATAC CGGCTCGGCG CGCTCCAGCA GATGGCCGAG
GAGGAGTTCG ACGTCCTGGT CATCGGCGGC GGCGTGGTCG GGGCCGGGGC CGCGCTCGAC
GCGGCCACCC GCGGGCTGTC CGTCGCCCTG GTCGAGGCGC GCGACTGGGC CGCCGGGACC
TCGAGCCGCT CCAGCAAGCT GATCCACGGC GGCCTGCGCT ACCTGGAGCA GCGCGACTTC
GGCCTGGTGC GCGAGGCGCT GACCGAGCGC AGCCTGCTCC TGAACCGGAT CGCGCCGCAC
CTGGTCCGGC CGGTCCCCTT CCTGCTGCCC CTGCGGCACC GGGTATGGGA GCGCTTTTAC
ATCGGCGCCG GCGTCCTGCT CTACGACACC ATGGGCGGCG CGCGGACCCT GCCTCGCCAC
CGCCACCTGA GCAAGACCGC GGCGCTGCGG CGCGCGCCGG CCCTGCGCTC GGACTCGCTG
ACCGGCGCGA TCCAGTACTA CGACGCCCAA GTCGACGACG CGCGCTTCGT GATGGCGCTG
GCGCGGACCG CGGCGCAGTA CGGGGCGCGC GTGGCGACCC GCACGAAGGT CACCGGACTG
CTGCGCGAGG GCGGCCGCGT CACCGGCGCG GTGGTGCGGG ACCTGGAGGG CGGCGGCAGC
ATCGAGGTGC GGGCCCGGCA GGTCGTGGCG GCGACCGGGG TGTGGACGGA CGACATCCAC
GAGCTGGCGC AGCTGCGTGC GTCGATCTCG GTGCGGGCGT CCAAGGGCGT CCACCTGGTC
GTGCCGCGCG ACCGCATCGA CCTGCGCACC GGGCTGATAT CCCGGACCGA GAAGAGCGTG
CTGTTCATCA TCCCCTGGGG TCGGCACTGG CTGGTCGGCA CCACCGACAC CGACTGGGAC
CTGGACCGCG AGCACCCGGC GGCCAGCCGC GCCGACATCG AGTACTTGCT CGAACACGCC
AACGCGGTCC TCGCCAAGCC GCTGACGGAG GAGGACATCG AGGGCGTGTA CGTCGGCCTG
CGACCCCTGC TCTCCGGCAC CGCGGACCAG ACCACGAAGC TCTCCCGCGA GCACGTCGTC
GCCTCCCCGG CACCCGGCCT GGTGGTCGTC GCCGGCGGCA AATACACGAC CTACCGCGTG
ATGGCCAAGG ACGCCATCGA CGCCGCCGTC GAGGACCTGG GCACCGCCGA CGAGGCGAAG
ATCCCCGACT CGGTCACCGA CAAGGTCCCG GTCCTCGGCG CCGAGGGCTT CGCCGCACGC
TGGAACGAAC GAGCCCGCAT CGCCCGCCGC ACCGGCCTGC ACCAGGTCCG CGTCGAGCAC
CTGCTCCGCC GCTACGGCAC CTGCGTCGAG GAACTGCTCG AACTCATCGC CGCCGACAAA
TCCCTCGGCG ACCCGATCGC CGGCGCCGAC GACTACCTGC GCGTCGAGGC GGTCTACGCG
GCATCGCACG AGGGCGCCCT GCACCTGGAG GACGTGCTGA CGCGCCGCAC GCGGATCTCG
ATCGAGGCCT TCGACCGCGG TGTGGCGGCG GCGCCGGAGG TCGCGGCGCT GATGGCACCG
GTGCTGGGCT GGAGCGAGGC GACGGTGCGC GAGGAGGTGG AGCGCTACCG CGGCCGCGTC
GAGGCCGAGC GGGCTTCGCA GGCTCGGGAG GACGACGCGG AGGCTGATGC GGTGCGGCGG
GCTGCGCCGG ATTTGGACGA TGGGGCGCGG GGTGGTGGTG GCGCTGGCGC TGCTGGTGCT
GCTGACGCGC GGGAGGTTGA TGCGGCGAGT TGCGGGGCGG CGGCTTCGGA GAAGCAGCGC
TGA
|
|---|
| Protein sequence | MQSTPLGAQY RLGALQQMAE EEFDVLVIGG GVVGAGAALD AATRGLSVAL VEARDWAAGT
SSRSSKLIHG GLRYLEQRDF GLVREALTER SLLLNRIAPH LVRPVPFLLP LRHRVWERFY
IGAGVLLYDT MGGARTLPRH RHLSKTAALR RAPALRSDSL TGAIQYYDAQ VDDARFVMAL
ARTAAQYGAR VATRTKVTGL LREGGRVTGA VVRDLEGGGS IEVRARQVVA ATGVWTDDIH
ELAQLRASIS VRASKGVHLV VPRDRIDLRT GLISRTEKSV LFIIPWGRHW LVGTTDTDWD
LDREHPAASR ADIEYLLEHA NAVLAKPLTE EDIEGVYVGL RPLLSGTADQ TTKLSREHVV
ASPAPGLVVV AGGKYTTYRV MAKDAIDAAV EDLGTADEAK IPDSVTDKVP VLGAEGFAAR
WNERARIARR TGLHQVRVEH LLRRYGTCVE ELLELIAADK SLGDPIAGAD DYLRVEAVYA
ASHEGALHLE DVLTRRTRIS IEAFDRGVAA APEVAALMAP VLGWSEATVR EEVERYRGRV
EAERASQARE DDAEADAVRR AAPDLDDGAR GGGGAGAAGA ADAREVDAAS CGAAASEKQR
|
|---|
| |