Gene Caci_5114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5114 
Symbol 
ID8336468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5873102 
End bp5873398 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content68% 
IMG OID644958212 
Productprotein of unknown function DUF427 
Protein accessionYP_003115814 
Protein GI256394250 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.92446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.289964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGC GAGCCGTATG GAACGGCCAG GTCCTGGCCG AGAGCGACGA CACCGTGGTC 
GTCGAGGGCA ACCACTACTT CCCGGCGGAG TCGCTGAACG GCGAGTTCTT CTCCGCCAGC
GAGACCCACT CCGTCTGTCC GTGGAAGGGG CTGGCCAGCT ACTACACCGT CACGGTCGAC
GGCGAGGCCA ACTCCGACGC CGCGTGGTAC TACCCGCAGC CCAAGGCCGA GGCCGAGCAC
GTCCGCGACC ATGTGGCGTT CTGGCGCGGC GTGAAGGTGG AGCCCGTCGA CGCGTAG
 
Protein sequence
MAMRAVWNGQ VLAESDDTVV VEGNHYFPAE SLNGEFFSAS ETHSVCPWKG LASYYTVTVD 
GEANSDAAWY YPQPKAEAEH VRDHVAFWRG VKVEPVDA