| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5079 |
|---|
| Symbol | |
|---|
| ID | 8336433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5837091 |
|---|
| End bp | 5837606 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644958178 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN- binding |
|---|
| Protein accession | YP_003115780 |
|---|
| Protein GI | 256394216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.442391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0749215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGA TCGAACCGAT CGGGGAGCTC GACGCGCGGT TCAGCGAGCG CAGCGCCAAG
GCGCGGCCGT GGGCCGAGGT CGCCGAGGTG CTGGCGGCCC GCGAGATGTT CTGGCTGTCG
AGCGTGCGCG GTGACGGACG GCCGCACGTG GTGCCGCTGC CGGCGGTCTG GCTCGACGGA
GCGCTCTACT TCTGCAGCGG CTCCGACGAG CAGAAGACCA AGAACCTGCT GTTCGACCCG
CGTTGTGTCC TGAGCGCGGG TGCCAACGCG TTGCACTTCG GACTGGACGT GGTGGTCGAG
GGAAGCGCCG CCCGCGTCAC CGATCAGGAC CTGCTCCAGC GCCTCGTCGC GCTCTGGAAG
TCCAAGCTCG ACTGGGACTT CCAGGCCGCC GAGGACGGGT TCCGCGACCC TCACGCCCCG
AACAGCTCCG TGTTCGTCTT CGGCGTCAAG CCGGTGAAGG TCCTTGCCTT CGACAAGGGT
CCCTACGGTC AGACGCGCTA CAGCTTCCCC GCCTGA
|
|---|
| Protein sequence | MPEIEPIGEL DARFSERSAK ARPWAEVAEV LAAREMFWLS SVRGDGRPHV VPLPAVWLDG
ALYFCSGSDE QKTKNLLFDP RCVLSAGANA LHFGLDVVVE GSAARVTDQD LLQRLVALWK
SKLDWDFQAA EDGFRDPHAP NSSVFVFGVK PVKVLAFDKG PYGQTRYSFP A
|
|---|
| |