| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5056 |
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| Symbol | |
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| ID | 8336410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5803919 |
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| End bp | 5804794 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958155 |
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| Product | UspA domain protein |
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| Protein accession | YP_003115757 |
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| Protein GI | 256394193 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.466483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTC CCGTCGTCGT CGGCATCGAC GACATGGACC AGAGCCCCCA CGCGCTGGAG
CTGGCGGGCA TCGAGGCCGA ACTGCGCGAC GCGCCGCTAT GGGTCGCCCA CGCCTACCAC
CGGGTCCCGC CGGTGGTCAC GGCCGCCGCC GACGGCAGCG CCCCGACCGC GCACGCGGCG
CTGGAATCGA CCGCGGAACC GCTGGCCACA GCCCTGAAAC AGCTCCACGC CGACCATCCG
CGCCTGCAAG TCCGCAGCTA CGCGATGAGC GGACCGGCCG CTGCCGGGCT CGCCGCCTTG
GCCGAGGAAG CCGAGCTGCT CGTGCTGGGC CACCGCGGCC GCGGTGGCTT CGCCGGCATG
CTGCTGGGCT CGGTCGCGCT GCGTACCGTG GCGCACGCCC GCTGCCTGGT GGTGGTCGCG
CGCGGCGCCC GGCGGGCCAT GAAGCGCGTG GTCGTCGGCA TCGACGTCGA CGACGCCACC
GCCGGTCGGG CCCAACTCGC CTTCGCCTTC GAGGAGGCAG TCCTGCGCGG CGCGGAGCTG
GTCGTGCTGC ACACCTGGGA GGATCCTGGC GCGTTCTATC CCGACCCCAC CGGCGACTAC
ACGCGCGACC ACCTCGCGAC GCTCGACGAC GACCACCGCC AGCGCCTGCA CGCGGCACTG
AAGCCGTGGC GGGCGGCGAA TCCCGACGTC GCGGTCGACG TCCGGGTCGA GGGCGGTTCC
GCCGCCCGGC ATTTGGTCGA AGCCAGCAGC CACGCCGATC TGCTGATCGT CGGCGGCCGT
CTGCGCCGCG ACGGCGACGG CATGCGTCTG GGAGCTCTGG CCTATTCGCT GCTGCACCAC
GCGCGATCCC CGGTGGTCAT CGTTCCGGAG CGGTGA
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| Protein sequence | MIAPVVVGID DMDQSPHALE LAGIEAELRD APLWVAHAYH RVPPVVTAAA DGSAPTAHAA
LESTAEPLAT ALKQLHADHP RLQVRSYAMS GPAAAGLAAL AEEAELLVLG HRGRGGFAGM
LLGSVALRTV AHARCLVVVA RGARRAMKRV VVGIDVDDAT AGRAQLAFAF EEAVLRGAEL
VVLHTWEDPG AFYPDPTGDY TRDHLATLDD DHRQRLHAAL KPWRAANPDV AVDVRVEGGS
AARHLVEASS HADLLIVGGR LRRDGDGMRL GALAYSLLHH ARSPVVIVPE R
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