| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5012 |
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| Symbol | |
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| ID | 8336366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5740088 |
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| End bp | 5740807 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644958111 |
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| Product | GntR domain protein |
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| Protein accession | YP_003115713 |
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| Protein GI | 256394149 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.474023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTCC AGGTACGCGG TCTGCACGGC CAGGCCGTCG ACGTGATCGG AGAGCGGATC
GTGCGCGGCG ACAACGCCCC GGGCGATCTG CTCTATCCCG ATCAGATCGA GGCCGAGCTC
GGGGTCAGCA AGACCGTGGT GCGCGAGGCG CTGCGGGTCC TGGCTTCCAA AGGACTCATC
GACTCCCGCC AGAAACGCGG CACGTTCGTC CGGCCGCGCG CGGACTGGAA CCTGCTGGAC
GCCGACGTCC TGCGCTGGCG CGGACAGGGA GTGCCCGACG AGGGCTTCCT GGACGATCTG
GCCGAGGTCC GCGCGATCGT CGAACCGGCC GGCGCCCGGC TGGCGGCCCG CCGCCGCACC
GAGGCCGACC TGGTCGCGCT GACCGAGGCG ATCGAGCAGA TGGACGCCGC CGGCGGCGAC
GTCCCGGCGA CCGTCGAGGC CGACCTGGCC TTCCACCGCG CCCTGCTGGC CGCCGCGCAC
AACGAACTGC TCACCGGCAT GGAGGTCGTC ATCGAAGCCG GTCTGCGCGT GCGCGACAGC
TTCGTGCACG GCGCCGACCA CGGTCCCGAC GACGCCGTCC CGGCGCACCG GGCGGTGGTC
GACGCGATCC GCGCCCAGGA CCCCGACGCG GCCTCGCGCG CCGTGGAGGA CCTGCTCGCC
AAGGCCATCG CCGACCTGCG GGCCCTGATA GCCGGACCCG ACGGGACGAC GACCGCATGA
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| Protein sequence | MSVQVRGLHG QAVDVIGERI VRGDNAPGDL LYPDQIEAEL GVSKTVVREA LRVLASKGLI
DSRQKRGTFV RPRADWNLLD ADVLRWRGQG VPDEGFLDDL AEVRAIVEPA GARLAARRRT
EADLVALTEA IEQMDAAGGD VPATVEADLA FHRALLAAAH NELLTGMEVV IEAGLRVRDS
FVHGADHGPD DAVPAHRAVV DAIRAQDPDA ASRAVEDLLA KAIADLRALI AGPDGTTTA
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