| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5007 |
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| Symbol | |
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| ID | 8336361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5732605 |
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| End bp | 5735157 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644958106 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003115708 |
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| Protein GI | 256394144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.285302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATAC CCAAACTCAT CGCGCTCGCC GCGTCGGCGG CGCTGTGGGC GACAGCGGGA
CCGGCGTGGG CCGGGTCTCA GGCCCGGCAC GCGCCGGCCA CGGTCCCGAT CAACAACCTG
GCCCGCACGC CGTATCAGGG CTGGAACACC TACTACGGCC TCGGGTCCAC CTTCACCGAG
CAGACCATCA AGGACGAGGC CGACGCGCTG GTGAGCAAGG GTCTGGCCGC CGCGGGCTAC
AACTACGTCT GGATCGACGG CGGCTGGTGG AACGGCGCGC GGGACGCCTC CGGCGCCATC
ACCGTAGACT CGACTCAGTG GCCTGACGGG ATGAAGGCGG TCGCCGACTA CATCCACTCG
CGCGGGCTGA AAGCAGGCAT CTACACCGAC TCCGGCCTCA ACGGCTGCGG CGGCGCCAAC
CAGGGCAGCT ACGGCCGCTA CCAGCAGGAC GTCAACCAGT TCGCCGGGTG GGGCTACGAC
GCGGTGAAGG TCGACTTCTG CGGCAGCGAG CAGATGGGAC TGGACCCGGC CACCGTCTAC
GGCCAGTTCC GCGACGCAGT CCTGAACAAC AGCAGCCACC GCCCGATGCT GTTCAACATC
TGCAACCCCT TCATCCCCGA GACCGGCGCC GCGCCCGGCC GCAGCGCGTT CGACTCCTAC
ACGTTCGGCC CGAGCACCGG GAACTCCTGG CGGACCGACA CCGACATCGG CTTCCCGAAC
GACGTCCGCT ACTCCGACGT GCTGCGCAAC CTGGACGCCG ACGCCGCGCA CCCGGAAGCC
GCCGGTCCCG GGCACTGGAA CGACCCGGAC TATCTGGGCC CTGATCTGGG CATGACCGAC
GCCGAGTCCC GCTCGCAGTT CTCAATGTGG TCGATCGTCG CGGCTCCGCT GATGATCGGC
TCGGATGTAC GCAAGCTCTC CGACAGCGCC GTCGCTATGC TCACCAACGC CGAAGTGCTC
GCGGTAGACC AGGACCGGCT GGGAATTCAG GGCACTGCGT TGTCCGCCCC GACCGCCTCC
GGCGCCCAGG TCTGGACCAA GCCGCTCGCC AACGGCGACG TCGCTGTCGC GCTGCTCAAC
CGCGGCACGA CCCCGCAGCT GATCTCCACG ACCGCCGGCA AGATCGGCCT GTCCACGTCG
GGCAGCTACG CCGTGCGCGA TCTGTGGCAG CACTCGACGA CCGAGTCGGC CGGCACGATC
TCCGCGACCG TCGCCCCGCA CGACGTCGTG CTGTATCGGG TCTCCCGCAA CGGAAACCCG
GCGACCATGA CGCCGGCGAC CACGCTGTCC CCGGCGACCC TGACCGCGAC CGCGCAGGCC
GCGCTTCCCC TGGTCGCCCC CGGCGACTCC TTCCCGGTCT CGGCCACGTT CACCGACAAC
GGCCGGCTCG CCGTCCGGAA CGTGAAGCTC ACGCTCGCCG TCCCGGCGGG CTGGACCGCC
ACGCCGACCA CCCCGGCCGC GAAGGACCGC CTCGACAGCG GGCAATCGAT TGCGGCGACC
TGGCAGGTGA CCGCCGCTCC AGGCGCTCTG CCCGGTACGG ACCAGCTCGC GGTGACTGCG
GGCTACGACT GGCAGGGTGC TTACTCCGGT GCGACATCAA GGCTCCAGAC ACTCAGCGCC
ACCGAGTCGA CGCAAGTCCA GGTCCCCGCT GCGCCGCCGT CGGGCACCGG TCCGCTGAGC
CACCATCCCT GGCTCGACGC GGCGAGCGGC TACCTCGTGC CCCGGGTCGA CCTCGACGAT
GCCGGCGGCG GGCCGCTGAC GATGCACGGC GTCGGGTACC CGACCGGTGT CGGCACCGCG
TCGCCCTCGA CGATCGACTA CTACGTCGGC GGCCAGTGCA GCACGCTCAC CGCCACGGTC
GGCATCGACG ACTCGGCGGA CTTCGACCCG ACCGGCGGGA CGGCGGTGTT CCAGGTCTAC
GGCGACGGCG TGAAGCTGTA TGACAGTGGT CTGGTGACCC GGGCCGCGCC TCAGAGCGCG
TCGGTGAATC TGGGTACTGC GAAGGTGATC AGCCTGGTCG TCGGGGACGG CGGCGACGGC
GGTTACAACG ACCGCACGGA CTGGGGCGGG CTGCGGATCA CCTGCGGCGC GCCGGTCGGC
ACGCAGCCCA GCGGACCCTG GCCGCACTTC GCGCCCTCGT CCTCGGTGTC CGCGACGGCC
ACCAGCGCCA ACGCCGGCTA CCCGGCGGGC AACGCGGTGG ACGGCCAGGT GACCACTTTG
TGGCACTCGC AGTTCAGTCC GGTCCACGAC CCGCTGCCGA TCTCGCTGAC GATGGACCTC
GGCTCGGTGC AGACGGTCAC CGGACTGACC TACCAACCCC GCCTCGACGG CGCGATCACC
GGTACCATCA CCGGTTACAC CGTCGAGGTC AGCAGCGACG GCGTCACCTT CACCCCGGCG
GCAGCGGCGG GGACGTGGAC GCAGGACGCG CTGCTGAAGT CCGTTGAATT CGCTCCGGTG
TCGGCTCGCT ATGTGCGACT GACTGCGACT GCGGCAGCCG ACGGCTACGC CTCGGCGGCT
GACGTCAGCG TGGCGGCGCG ACCGACCGCC TGA
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| Protein sequence | MLIPKLIALA ASAALWATAG PAWAGSQARH APATVPINNL ARTPYQGWNT YYGLGSTFTE
QTIKDEADAL VSKGLAAAGY NYVWIDGGWW NGARDASGAI TVDSTQWPDG MKAVADYIHS
RGLKAGIYTD SGLNGCGGAN QGSYGRYQQD VNQFAGWGYD AVKVDFCGSE QMGLDPATVY
GQFRDAVLNN SSHRPMLFNI CNPFIPETGA APGRSAFDSY TFGPSTGNSW RTDTDIGFPN
DVRYSDVLRN LDADAAHPEA AGPGHWNDPD YLGPDLGMTD AESRSQFSMW SIVAAPLMIG
SDVRKLSDSA VAMLTNAEVL AVDQDRLGIQ GTALSAPTAS GAQVWTKPLA NGDVAVALLN
RGTTPQLIST TAGKIGLSTS GSYAVRDLWQ HSTTESAGTI SATVAPHDVV LYRVSRNGNP
ATMTPATTLS PATLTATAQA ALPLVAPGDS FPVSATFTDN GRLAVRNVKL TLAVPAGWTA
TPTTPAAKDR LDSGQSIAAT WQVTAAPGAL PGTDQLAVTA GYDWQGAYSG ATSRLQTLSA
TESTQVQVPA APPSGTGPLS HHPWLDAASG YLVPRVDLDD AGGGPLTMHG VGYPTGVGTA
SPSTIDYYVG GQCSTLTATV GIDDSADFDP TGGTAVFQVY GDGVKLYDSG LVTRAAPQSA
SVNLGTAKVI SLVVGDGGDG GYNDRTDWGG LRITCGAPVG TQPSGPWPHF APSSSVSATA
TSANAGYPAG NAVDGQVTTL WHSQFSPVHD PLPISLTMDL GSVQTVTGLT YQPRLDGAIT
GTITGYTVEV SSDGVTFTPA AAAGTWTQDA LLKSVEFAPV SARYVRLTAT AAADGYASAA
DVSVAARPTA
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