| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4890 |
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| Symbol | |
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| ID | 8336244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5572790 |
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| End bp | 5573566 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957989 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_003115591 |
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| Protein GI | 256394027 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.833858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGT CACAGCAGGA CATCTCTCGT GAGATCGCCG AGCGGGCCGA GGCGGCTGCG
GCTGCGGATG CGACCGCAGC CGCGGACACC GAGCGGCTGC GCCACCACCC GGCGCGCGAC
TACGCGCCCT ATCGCAGCAG CCTGTTGCGC CACCCCAAGC AGCCGCTGGT GACCGTCCGG
GATCCCGAGG CGGTCGAGCT GTCCGGCCCG GTGTTCGGCG TCAGCGACGT CACCGAACTC
GACGCCGACC TGACCCGGCA GCACCTGGGC GAACCGCTCG GCGAGCGGAT CACCGTGACC
GGCCGGATCC TGGACCGCGA CGGCCGCCCC GTGCGGGGGC AGCTCGTCGA GATCTGGCAG
GCCAACGCCT CCGGCCGCTA CCTGCACCAG CGCGATCAGC ACCCGGCGCC GCTCGATGCC
AACTTCACCG GCGTGGGCCG CTGCCTGACC GACGGCGAGG GCGGCTACCG GTTCACCACG
ATCAAGCCCG GCGCCTATCC CTGGCGCAAC CACACCAACG CCTGGCGGCC CGCGCACATC
CACTTCTCGC TGTTCGGCAC GGCGTTCGCC CAGCGCCTGA TCACGCAGAT GTACTTCCCC
GGCGACCCGC TCTTCCCCTA CGACCCCATC CTGCAGTCCG TCACCGACGC CGCCGCCCGG
AACCGGCTGG TCGCCGCCTA CGAGCACGAG CTGTCCGCCG CCGAATGGTC GCTCGGCTAC
CGCTGGGACA TCGTGCTCGA CGGTCCCGCC GCCACCTGGA CCGAAGAAGG ACGCTGA
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| Protein sequence | MALSQQDISR EIAERAEAAA AADATAAADT ERLRHHPARD YAPYRSSLLR HPKQPLVTVR
DPEAVELSGP VFGVSDVTEL DADLTRQHLG EPLGERITVT GRILDRDGRP VRGQLVEIWQ
ANASGRYLHQ RDQHPAPLDA NFTGVGRCLT DGEGGYRFTT IKPGAYPWRN HTNAWRPAHI
HFSLFGTAFA QRLITQMYFP GDPLFPYDPI LQSVTDAAAR NRLVAAYEHE LSAAEWSLGY
RWDIVLDGPA ATWTEEGR
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