Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4887 |
Symbol | |
ID | 8336241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5569383 |
End bp | 5570576 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644957986 |
Product | 3-oxoadipate enol-lactonase |
Protein accession | YP_003115588 |
Protein GI | 256394024 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR02425] 4-carboxymuconolactone decarboxylase [TIGR02427] 3-oxoadipate enol-lactonase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.307912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTG TGCCGCACTT CGTGATCGAG GGTCCGTCAG ACGCGCCGCC GCTGCTGTTG GCGCCGTCCC TGGGAACCTC GCTGGCCGTA TGGGACGGGC ACGTCAAAGC CCTGGCCCGA GACCACCGGG TGATCCGCTG GGACCTGCCG GGACACGGCG GCTCCGCGGC CACCCTCGTC GGCGAGCGGG CGACCGTCGC CGAACTGGCC GACCTGGTCC TGGCCCTGGC CGACCACCTG GGGTTGGAGC GCTTCGCCTA CGCGGGAATC TCCATCGGCG GAGCGGTGGG CGCCCATCTT GCCGTCCGCC ATCCCGACCG GATCACCTCC CTGGCACTGG TCTGTTCCTC CGCTCACTTC GGCGAGCCGC AGGCCTGGCT TGAGCGTGCC GCGCGGGTCC GTCGCGAAGG CACGGAATTC CTGGCCGCAT CCGCGCCGGC CCGCTGGTTC ACGTCGGACT TCCCCGGCGG CGAGGCCCTG GAGAAGCTGA TCTCCGACCA GCGTGCCGCC GACCCGGTCG CCTATGCCGC GTGCTGCGAA GCCCTTGCCG ACTGCGACCT TCGCGGCGAG CTGGACCGGA TCACCGCGCC CACGCTCGTC ATCGCCGGAC GCGAGGACAC CGCCACCCCG CCGCCGCACT CGCGGGAGCT GGCCGACGGC ATCGCCGGAG CGGGACTTCT CGAGATCCCG GGTGCGGGCC ATCTCGCGCC GGTCGAACGC CCGCGGCCCG TCCTGGACGC CCTGCGCGCA CATTTCGGCG CCGCGCCGTC GGATGACGCC GAGCGTCACG CGGCGGGCAC CGCCATGCGC CGGGCCGTCC TCGGCGACGC CCACGTCGAC CGCGCGCTCG CCGCCGCCAC GCCGCTCACC GCCGGTTTCC AGGACTTCAT CACCCGCTAC GCCTGGGGCG AGATCTGGAC CCGCCCCGGC CTGGACCGCC GCACCCGCAG CTGCGTCACT CTCACCGCGC TGGTGGCCGG GGGTCACCAC GAGGAGCTCG CGCTGCACGT CCGCGCCGCC GTCCGCAACG GCCTGACTCC CGAGGAGATC GGCGAGGTGC TGCTGCAGAC AGCCGTCTAC TGCGGCGTCC CGGCCGCCAA CGCCGCGTTC GCCATCGCCC GCAGAGTCCT CGACGAGGCC ACCAGCGACG AGACCACCGC CGACGAGACC ACCGACCACA AGGACGACCA CTGA
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Protein sequence | MSLVPHFVIE GPSDAPPLLL APSLGTSLAV WDGHVKALAR DHRVIRWDLP GHGGSAATLV GERATVAELA DLVLALADHL GLERFAYAGI SIGGAVGAHL AVRHPDRITS LALVCSSAHF GEPQAWLERA ARVRREGTEF LAASAPARWF TSDFPGGEAL EKLISDQRAA DPVAYAACCE ALADCDLRGE LDRITAPTLV IAGREDTATP PPHSRELADG IAGAGLLEIP GAGHLAPVER PRPVLDALRA HFGAAPSDDA ERHAAGTAMR RAVLGDAHVD RALAAATPLT AGFQDFITRY AWGEIWTRPG LDRRTRSCVT LTALVAGGHH EELALHVRAA VRNGLTPEEI GEVLLQTAVY CGVPAANAAF AIARRVLDEA TSDETTADET TDHKDDH
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