Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4868 |
Symbol | |
ID | 8336222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 5536812 |
End bp | 5537765 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957967 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003115569 |
Protein GI | 256394005 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00194851 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAATG ACAGTTTCAG AGGCAAGACC GCCCTCGTCA CCGGCGGGTC GCGCGGACTG GGGCTGTTGA TCGCCCAAGA ACTCGGCGCT CGCGGCTGTC AGGTGATGAT CTGCGCCCGC GACAGCGGTG AACTGCAGGA GGCCGAACGG CTTCTGCGGG CCCGAGGCGT CGAGGCGGCC AGCACGGTGT GCGACATCAG GGATCCGGAC GCCGGCCAGA ATCTCCTCGA CGCGGTCGAG AAGCGGTTCG GACAGCTGGA CATCGTGGTG AACAACGCCG GAATCATCCA GGTGGGCCCG ATGGAGGCGC TGACCGAGCG GGACTTCGAG AACGCCTGGC AGACGATGTT CGCCGGACCG CTGCGCCTCA TCTCGGCCGT GCTGCCCGGC ATGCGGGAGC GCCACAGCGG CACCATCGTC AACATCGCCT CCATCGGCGG GCGCATCCCC GTCCCGCACC TGCTGCCCTA CGTCGCCGCG AAGCACGCGC TGGCCGGGTT CTCCAGCGGT CTGCGAGCCG AACTCGCCGC GGACGGCGTC AGCGTCACCA CCGTCGTCCC CGGACTGATG CGCACGGGTT CACACCGTGC CGCCAGGTTC TCCGGTCAGA GCCGCCGCGA ATACGCGTGG TTCGCCACCG CCGCGTCGCT GCCGCTGCTG TCCGGCAGCG CCGACCGGGC AGCCCGCGCG ATCGTCCGCG CCGCCGAACA CCGGCGGCCG GAGTTGGTGT TCACCCCGGC GGCGAAGCTG GCGTGCCGGG CTTATGGGCT GGCTCCCGCC ACGACCACAC GTCTGCTCGG CGTCGCAGCC CGGCTGCTGC CGAGTGCGAC CTCGACTCCG GAGCACGACG TGCCCGGCGT CCAGAACACC CGCCAGCAGG GATCTTTTCT GGCCGGTATG ACAGTGCTCG GCGAGCGTGC GGCACAGCGC AACAACGAAC CCGGCAGCGC CTGA
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Protein sequence | MGNDSFRGKT ALVTGGSRGL GLLIAQELGA RGCQVMICAR DSGELQEAER LLRARGVEAA STVCDIRDPD AGQNLLDAVE KRFGQLDIVV NNAGIIQVGP MEALTERDFE NAWQTMFAGP LRLISAVLPG MRERHSGTIV NIASIGGRIP VPHLLPYVAA KHALAGFSSG LRAELAADGV SVTTVVPGLM RTGSHRAARF SGQSRREYAW FATAASLPLL SGSADRAARA IVRAAEHRRP ELVFTPAAKL ACRAYGLAPA TTTRLLGVAA RLLPSATSTP EHDVPGVQNT RQQGSFLAGM TVLGERAAQR NNEPGSA
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