| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4845 |
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| Symbol | |
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| ID | 8336199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5515759 |
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| End bp | 5516556 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957945 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003115547 |
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| Protein GI | 256393983 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.059143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCCA TCCCTGTCGC CCCGGAGGAA CTGGCCCGTG AACGGGCTGC GGCCCGGGCT
GCGCTGGCGC GTCTGAGGAA GATGTCGCCC GACGACAGCG AGTACGAGGC ACTGCGCGAG
TACGTCATCG GCGAGTACAT GTCCTATGCC CGCTTCGTGG CGGCCAGGTT CCGCCTGCGC
GGTGAAACGC AGGCGGATCT GGAGCAGGTC GCCTATCTGG GCCTGGTCAA AGCCGTCGAC
AACTTCGACC CCGACTACGG CGCGACGTTC CTCACCTACG CCACGCCGAT GATCGCCGGC
GAGGTGCGGC GCCATTTCCG GGACACCACC TGGCATGTGC ACGTTCCCCG CCGCGCTCAG
GAGAACGCGT TGGCGGTGCG GGCTGTCGAG CGGGAGCTGA CCCAGCAGCT GGGTCGCGCG
CCGAGTGCGG CGGAGATCGG CCGCCGGCTG GATCTGTCGG CCGACGAGGT CGCCGAGGCC
TACGAAGCCA GCGCCGCGCA CCACACCGCC TCGCTGGACG TGCCGGTGGC CATGGCCGAC
GGCGACGGCG CCAGCCTGGG GGACCTCCTC GGCGACGAGG ACCCCGGCTT CGACTCGGTC
GTCGACCGGG AAGCCCTCAA GCCGCTGCTG GCCGAACTCA GCCCGCGCGA CAAGCGGATC
CTGCTGATGA AGTTCTTCCG CAACATGTCC CAGGCACAGA TCGGCGCCGA GATCGGAGTC
TCGCAGATGC AGGTCTCCCG CCTGCTGTCG CAGATCATCG GCAGCTTGCG GGACCGACTG
GAGGTCGGGA AGAACTGA
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| Protein sequence | MAPIPVAPEE LARERAAARA ALARLRKMSP DDSEYEALRE YVIGEYMSYA RFVAARFRLR
GETQADLEQV AYLGLVKAVD NFDPDYGATF LTYATPMIAG EVRRHFRDTT WHVHVPRRAQ
ENALAVRAVE RELTQQLGRA PSAAEIGRRL DLSADEVAEA YEASAAHHTA SLDVPVAMAD
GDGASLGDLL GDEDPGFDSV VDREALKPLL AELSPRDKRI LLMKFFRNMS QAQIGAEIGV
SQMQVSRLLS QIIGSLRDRL EVGKN
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