Gene Caci_4820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4820 
Symbol 
ID8336174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5495368 
End bp5496195 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID644957920 
ProductPEP phosphonomutase 
Protein accessionYP_003115522 
Protein GI256393958 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TGACCGCCGA AGACCAGTAC CGCCGCGCCG AGACCTTCGC CTCCCTGCAC 
GCCGGACCCG ATGTGTTCGT GATCGCCAAC GCCTGGGACG CGGGCACCGC GAAGATCTTC
ACCGCGCTCG GATTCCAAGC CCTGGCGACC ACCAGCGCCG GCATCGCACA CTCCCTCGGC
CAGGGCGACG GCAGCATCAC CCGCGACGTG AGCTTGGCCA ACGCCGGCGC CCTGGTCGCC
GCCACCCACC TGCCGGTCGC CGCCGACCTG GAGAACGGTT ACGGCGCCAC CCCGGACCAC
GTCGCCGAGA CCATCCGCCT GGCTGCCGAC GCGGGCCTGG TCGGCGGCTC GATCGAGGAC
GCGCTCGGCG AGGAGATCAT CCCGCTGCCG GCGGCGCTGG AACGCCTCAC CGCCGCCATC
GAGGCCGCCC GCGCGCTCCC CTTCACCTTC ACCGTGACGG CGCGCGCCGA GAACTTCCTC
TACGGCCGCG ACGATCTGAA GGACACCGTC GCGCGCCTGC AAGCCTTCGA AGCCGCCGGC
GCCGACGTCC TGTTCGCCCC CGGGCTCACC ACCGAGGAGC AGATCCGCAC CGTCACCTCC
GAGGTCGGCA AGCCGGTCAA CGTCCTCGCC GGCGGAGCAC GGCTGAACGC GACCGTCGAG
CAGCTCGGCG CATGGGGCGT ACGCCGCATC AGCCTCGGCT CGAACCTCTC GCGCGCCGCG
ATGAGCGCCG CCATCGGCGC GGCGAAGGAG ATCGCGGAGC ACGGGACATT CGGATTCGCC
CAGAGCGGGG TGCTGCCGCA CGCAGACATC GAGCGGTACT TCGGCTGA
 
Protein sequence
MSLLTAEDQY RRAETFASLH AGPDVFVIAN AWDAGTAKIF TALGFQALAT TSAGIAHSLG 
QGDGSITRDV SLANAGALVA ATHLPVAADL ENGYGATPDH VAETIRLAAD AGLVGGSIED
ALGEEIIPLP AALERLTAAI EAARALPFTF TVTARAENFL YGRDDLKDTV ARLQAFEAAG
ADVLFAPGLT TEEQIRTVTS EVGKPVNVLA GGARLNATVE QLGAWGVRRI SLGSNLSRAA
MSAAIGAAKE IAEHGTFGFA QSGVLPHADI ERYFG