| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4800 |
|---|
| Symbol | |
|---|
| ID | 8336154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 5468832 |
|---|
| End bp | 5469683 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644957900 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003115502 |
|---|
| Protein GI | 256393938 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.176635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCGT ATCACGTGAC CATCGGCGCG TACGAGTTCA CCGCGACCGA GGAGGGCCCG
CAGGCCGGCC CGCCCGTGGT GCTGCTGCAC GGTTTCCCGC AGACCTCGGC GAGCTGGCAG
GCCGCCAGCC GGCTGCTGGC CGCCGACGGT CTGCGCACCA TCGCCTTGGA CCAGCGCGGC
TACTCCCCCG GCGCGCGCCC CCTGGAGGTC TCCGAGTACC ACGTGAACCG GCTGGTCCAG
GACGTCGTCG GCCTGCTGGA CGCCCTGCAC CTGCCCAGCG CGCACCTGGT CGGGCACGAC
TGGGGCGCGA TCGTCGCCTG GCACGCCGCG GTGGCGCACC CGGACCGTTT CAGGACCTTG
ACGGCGGTGT CGGTGCCGCA CCTGAAGGGC TTCTACGAGG TCCTGGCCGA CCCCGGCCCG
GAGGGCGAGG ACCAGCGGCG GCGCTCGGAG TACGTGCAGC TGTTCCGCAT GGACGACAAG
CCCGAGGACG TCCTACTCGC CAACAGCGCC CGCGCGCTGC ACGACCTGTT CTCCCCGCTG
CCGGAATCGG CGATCCTGCC GCACTACGGC GCCCTCGGCC AGCGCCCGGC GCTCACCGCC
GCGCTGAACT GGTACCGCGC GATCGACGTG AAGCAGTCGG CGGCGCTGGC GAACGTGCGG
ATCCCGACGA CGTTCGTGTG GTCCACCGAG GATGTCGCGA TCGGGCGTGC CGTGGCGGAA
AACTGCGCAC AGTGCGTCGA GGGCCCGTAC CGGTTCGTCG AGCTGAACGG CGTCAGCCAC
TGGATTCCGG ACCAGGCGCC GGTGGAGTTG GCGCGCGCCG TGGTCGATCG CGTGCGCTCT
GTGGACAACT GA
|
|---|
| Protein sequence | MRAYHVTIGA YEFTATEEGP QAGPPVVLLH GFPQTSASWQ AASRLLAADG LRTIALDQRG
YSPGARPLEV SEYHVNRLVQ DVVGLLDALH LPSAHLVGHD WGAIVAWHAA VAHPDRFRTL
TAVSVPHLKG FYEVLADPGP EGEDQRRRSE YVQLFRMDDK PEDVLLANSA RALHDLFSPL
PESAILPHYG ALGQRPALTA ALNWYRAIDV KQSAALANVR IPTTFVWSTE DVAIGRAVAE
NCAQCVEGPY RFVELNGVSH WIPDQAPVEL ARAVVDRVRS VDN
|
|---|
| |