Gene Caci_4764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4764 
Symbol 
ID8336118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5426037 
End bp5427269 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content74% 
IMG OID644957864 
ProductSaccharopine dehydrogenase (NAD(+), L-glutamate- forming) 
Protein accessionYP_003115466 
Protein GI256393902 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA CCTCCCAGGA CGCGTCCCGG ACCAGCTACG ACGTGGTGCT GTTCGGCGCC 
ACCGGCTTCA CCGGATCCCT GGTCGCCGAC TATCTCGCCG AGCACGCCCC GGAGGCCGTG
CGCTGGGCGC TGGCCGGTCG CTCGGCGGCG AAGCTGCAGG CGGTGCGCGA CCGGCTGGCC
GCGCGCCGTC CGGAGCTCAA GGACCTGCCG CTGGTGATCG CCGACGCCGG CGACCCGGTG
TCGCTGCGCG AGCTGGCCGG GCAGACCCGC GTCGTGATCA GCACGGTCGG ACCCTACCTG
CACCACGGCG AGGCGCTGGT CGCGGCGTGC GCCGAAGCAG GATGCGACTA CGTGGACCTG
ACCGGCGAGC CAGAGTTCGT CGACACCATG TATCTGAAGT ACCACGCGCG CGCCGTGGAG
ACCGGCGCGC GGCTGGTCCA CTGCTGCGGG TTCGACAGCA TCCCGACCGA CCTCGGCGTG
CTGTACACGA TGCGCGAACT CGGACCGCAG ACCGGACCGG TGCGGGTGTC GGGGTTCATC
CGGGTGCGGG GCGCGTTCTC CGGCGGGACG CTGGCCTCGG CGATGCTCGC GATGTCCCGG
CCCAAGGCGA TGGCGCGCAC CTCCAAGGCC CGGCGCGCCG CCGAGCCGAA GCAGCCGGGA
CGCCGCTTCG GGGTGCTGGC CGGACCGCCC CGGCACGACA AGACCGCGCA CGCCTGGATC
GCGCCGCTGC CGGTGATCGA CAACCAGGTG GCGCTGCGCA GCGCCGCCGC GCTGCCGGAG
TACGGGCCCG ACTTCCGCTA CGGGCACTTC GCCGCGGTGC GCCGCCTGCC GATCGCGCTC
GGGGCGCTGG CGCTCGTCTC CGGACTGGCG ATCTCGGCGC AGGTCAAGCC GCTGCGAGCG
GCCGTGGGCA AGGTGGTCAA GCCCGGTCAG GGCCCTGACG AGCGGCGCCG CGCCGGCAGC
TGGTTCACGC TGCGGCTCAA GGCCGAGGCC GGCGGGCGCA CCCTGGTCAC CGAGGTCTCC
GGCGGCGATC CCGGCTACGG CGAGACGGCG AAGATGCTCG CCGAGTCGGC GCTGTGCCTG
GCCTTCGACG ATCTGCCGCC GACCGCGGGG CAGCTCACCA CCGCCACGGC GATGGGAGAC
GCGCTCATCG CGCGGTTGAG CCGGGCGGGC ATCACGTTCC GCACGCTGTC CGCACCTCCG
ACGAGCGCCC CGGGACCCGC CGCGCGCCGG TAA
 
Protein sequence
MADTSQDASR TSYDVVLFGA TGFTGSLVAD YLAEHAPEAV RWALAGRSAA KLQAVRDRLA 
ARRPELKDLP LVIADAGDPV SLRELAGQTR VVISTVGPYL HHGEALVAAC AEAGCDYVDL
TGEPEFVDTM YLKYHARAVE TGARLVHCCG FDSIPTDLGV LYTMRELGPQ TGPVRVSGFI
RVRGAFSGGT LASAMLAMSR PKAMARTSKA RRAAEPKQPG RRFGVLAGPP RHDKTAHAWI
APLPVIDNQV ALRSAAALPE YGPDFRYGHF AAVRRLPIAL GALALVSGLA ISAQVKPLRA
AVGKVVKPGQ GPDERRRAGS WFTLRLKAEA GGRTLVTEVS GGDPGYGETA KMLAESALCL
AFDDLPPTAG QLTTATAMGD ALIARLSRAG ITFRTLSAPP TSAPGPAARR