| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4697 |
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| Symbol | |
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| ID | 8336051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5353428 |
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| End bp | 5354756 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644957797 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115399 |
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| Protein GI | 256393835 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00367387 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATCCAA GAACGGCACG AACCCTTCGC TCGGCCGCCG CGGCCGCCAC CACCGCCGTG
CTGGCGCTGA CCGCCGCGTG CTCCTCCTCG GCGTCCTCGT CCTCGAAGGC GCCGGCGGAT
CCGACGAAGC CGGTCACCAT CACCGTGTGG ACCGGACAGG ACGTGAACCC CGAGAAGCTG
CTGGAGGGTC TGGCCAAGCA GTTCCACGCG GCGCACCCGA ACGTCACCGT CGACATCTCG
CCCGGCGCGC CGACCACCGA CCAGCTGCTG CCGAAGCTGA TCGCCGCCTT CACCAGCGGC
ACCTACCCGG ACATCTCCTA CAACTTCGGC AGCTGGGCCA CCCAGATGCA GCTGTCCGGC
CGCACCCTGG ACATCACCGA CAAGGTCAAG GACCCGGCGG TGAAGTGGGA CGAGTTCCCG
CCGGCGGCGC GGCAGACCGC GACGCCCAAC GGGCACGTGA TCGGCTTCCC GGCGGTCGTG
GACAACCTGG CGCTGATGTA CAACAAGAAG CTGTTCCAGG CCGCGGGCCT GTCCGAGCCC
ACGAACACCT GGACCTGGGA CGACTTCCGG GCGGCGGCGA AGAAGCTCAC CGACCCGGCG
AAGAACGTCT ACGGCACCGC CTACTCCGTC TCCGGGACCG AGGACACCAC CTGGCACTTC
TGGCCGCTGC TGTGGCAGAA GGGCGGCACC GTCCTGAACT CCGACAACAG CAAGGCCGCC
TTCGACTCCG ACGCCGGTGT GGCAGCCCTG ACGTTCCTGC AGCAGATGGC TGTGACCGAC
AAGTCCGTGT ACCTATCGCA GGACGACCAG AAGTACGCCG ACCTGTTCAA GTCCGGCCTG
ATCGGCATGA TCATGAGCGG GCCGTGGCAG CTGTCGGACA ACGTCGGAGC GAACCTGGAC
TACGGCGTCA CCTACCTGCC CTCCTTCGAC GGCACGAGCC ACCAGACGAT ATCCGGCCCG
GACCTGTGGA CCCTGTACGA CCACCACGAT GCCAACCGGA CCTATTGGTC CTACCAGTTC
GCGCAGTGGC TGACCTCGGC GCAGACCGAC CCGCAGTTCA ACCTCGCCAC CGGGAACCTG
CCGCTGCGCA GCAGCGAGGC CGGCAGCCAG GAGTTCCAGG ACTACGCCAA GCAGTACCCC
GGCGCGCAGA CACTCTTCGA CAACCTGAAG AACGCCACGA CCGCCCGGCC GACCGTCCCC
GGCTACGTCG GCTTGTCCCA GGCTGTCGGA CAGGCGATCG CCAAGGTGCT GCAAGGTCAG
GGGGATCCCA AGTCGGCCTT GCAAGACGCG GCGAAGGCGG CGGACGTCGC GCTGGCGCAA
GCGGACTGA
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| Protein sequence | MHPRTARTLR SAAAAATTAV LALTAACSSS ASSSSKAPAD PTKPVTITVW TGQDVNPEKL
LEGLAKQFHA AHPNVTVDIS PGAPTTDQLL PKLIAAFTSG TYPDISYNFG SWATQMQLSG
RTLDITDKVK DPAVKWDEFP PAARQTATPN GHVIGFPAVV DNLALMYNKK LFQAAGLSEP
TNTWTWDDFR AAAKKLTDPA KNVYGTAYSV SGTEDTTWHF WPLLWQKGGT VLNSDNSKAA
FDSDAGVAAL TFLQQMAVTD KSVYLSQDDQ KYADLFKSGL IGMIMSGPWQ LSDNVGANLD
YGVTYLPSFD GTSHQTISGP DLWTLYDHHD ANRTYWSYQF AQWLTSAQTD PQFNLATGNL
PLRSSEAGSQ EFQDYAKQYP GAQTLFDNLK NATTARPTVP GYVGLSQAVG QAIAKVLQGQ
GDPKSALQDA AKAADVALAQ AD
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