Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4668 |
Symbol | |
ID | 8336022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5317033 |
End bp | 5317785 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957768 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003115370 |
Protein GI | 256393806 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.623971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTGTC TAGACAGCAT ATACAATTCT TGTATGGCCG CATCCCAACC GTTGTACGAG CGCATCGAGA AGCAGCTGCG CCGCCGTCTG GCCACCGCCG CCGACGGCGA TCCGTTCCCC TCCGAGCCGC GGCTGGCGGA GGAGTTCGGC GTTTCGCGGA TGACGGTGCG CGCCGCCCTG GCCGGGCTGG AGCGCGACGG CTTGGTCGAG CGCGTGCCCG GCCGGGGCAG CTTCGTGCGC AAGGGCGCGG CGCATCGCCC CGTCGGCATC CTGCTGAGCT TCCACGACCA AGCGCTGGCC GAGGGCAAGA CCCCGCGCTC GCGCGTGCTT CACGCCGAGC TGCGTGAAGC CTCCTCGCAG GAGACCGCCG CTTTGTACGG CTTCGAGAGC GAGCACGCCG CATCAGTGGT CGCCATCAGC CGCGTCCGCC TCTTCGACGA CCTCCCGATC GCCGTCGAGC ACGCCGTCTT CCCCGCCGCC CTCAGCGCCC TGCTGGCCAC CGACCTGGAA ACCGGCTCGC TCCACAACGC CCTGCGCCGC CTCGGACGCA CTCCGACCCT CGGCTCCTCG GTCCTCACCG CCCGCACCGC CGGCGACGAT GCCCAGGAAC TCGGCGTCAC CCCGACCACC CCGATGCTCG TCGAGACCCG CTCCATCGTC GACCAGGACG GGAGCCCGCT GGAATACACC GTCAGCTCCT ACGTCGCTGA CCGCTACGCG CTCAAGGTCG ACTTCGACGT GTCGCAGTCC TGA
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Protein sequence | MSCLDSIYNS CMAASQPLYE RIEKQLRRRL ATAADGDPFP SEPRLAEEFG VSRMTVRAAL AGLERDGLVE RVPGRGSFVR KGAAHRPVGI LLSFHDQALA EGKTPRSRVL HAELREASSQ ETAALYGFES EHAASVVAIS RVRLFDDLPI AVEHAVFPAA LSALLATDLE TGSLHNALRR LGRTPTLGSS VLTARTAGDD AQELGVTPTT PMLVETRSIV DQDGSPLEYT VSSYVADRYA LKVDFDVSQS
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