Gene Caci_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4668 
Symbol 
ID8336022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5317033 
End bp5317785 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID644957768 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003115370 
Protein GI256393806 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.623971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGTC TAGACAGCAT ATACAATTCT TGTATGGCCG CATCCCAACC GTTGTACGAG 
CGCATCGAGA AGCAGCTGCG CCGCCGTCTG GCCACCGCCG CCGACGGCGA TCCGTTCCCC
TCCGAGCCGC GGCTGGCGGA GGAGTTCGGC GTTTCGCGGA TGACGGTGCG CGCCGCCCTG
GCCGGGCTGG AGCGCGACGG CTTGGTCGAG CGCGTGCCCG GCCGGGGCAG CTTCGTGCGC
AAGGGCGCGG CGCATCGCCC CGTCGGCATC CTGCTGAGCT TCCACGACCA AGCGCTGGCC
GAGGGCAAGA CCCCGCGCTC GCGCGTGCTT CACGCCGAGC TGCGTGAAGC CTCCTCGCAG
GAGACCGCCG CTTTGTACGG CTTCGAGAGC GAGCACGCCG CATCAGTGGT CGCCATCAGC
CGCGTCCGCC TCTTCGACGA CCTCCCGATC GCCGTCGAGC ACGCCGTCTT CCCCGCCGCC
CTCAGCGCCC TGCTGGCCAC CGACCTGGAA ACCGGCTCGC TCCACAACGC CCTGCGCCGC
CTCGGACGCA CTCCGACCCT CGGCTCCTCG GTCCTCACCG CCCGCACCGC CGGCGACGAT
GCCCAGGAAC TCGGCGTCAC CCCGACCACC CCGATGCTCG TCGAGACCCG CTCCATCGTC
GACCAGGACG GGAGCCCGCT GGAATACACC GTCAGCTCCT ACGTCGCTGA CCGCTACGCG
CTCAAGGTCG ACTTCGACGT GTCGCAGTCC TGA
 
Protein sequence
MSCLDSIYNS CMAASQPLYE RIEKQLRRRL ATAADGDPFP SEPRLAEEFG VSRMTVRAAL 
AGLERDGLVE RVPGRGSFVR KGAAHRPVGI LLSFHDQALA EGKTPRSRVL HAELREASSQ
ETAALYGFES EHAASVVAIS RVRLFDDLPI AVEHAVFPAA LSALLATDLE TGSLHNALRR
LGRTPTLGSS VLTARTAGDD AQELGVTPTT PMLVETRSIV DQDGSPLEYT VSSYVADRYA
LKVDFDVSQS