Gene Caci_4589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4589 
Symbol 
ID8335943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5221500 
End bp5221844 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content69% 
IMG OID644957690 
Productprotein of unknown function DUF952 
Protein accessionYP_003115292 
Protein GI256393728 
COG category[S] Function unknown 
COG ID[COG3502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.18352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00537497 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGATCT ACCACATCGC CTCGCGAACC GACTGGACTG ACGCCCTCAC GACAGGCGCG 
TATCATGTCT CCACTCGAGG TCGCACGGTC GAGCAGGAGG GGTTCATCCA CGCCTCCACG
GCGCCTCAAG TCGCCGGCGT CGCGAACGCC TACTACGCCG ACGCCGAGGA CCTCGTCCTG
CTCGTCATCG ATCCCGAGCG GCTGACCGCG CCGCTGAGGT ACGACGCGGT CCCCGGCGCC
GACGAGCCGT TCCCGCACAT CTACGGACCG CTGAACGCCG ACGCCGTCAC CGGCACCGCC
GAGCTGCGCC GGGATGCCGA CGGCCGGTAC GTCTTCGAGG GCTGA
 
Protein sequence
MTIYHIASRT DWTDALTTGA YHVSTRGRTV EQEGFIHAST APQVAGVANA YYADAEDLVL 
LVIDPERLTA PLRYDAVPGA DEPFPHIYGP LNADAVTGTA ELRRDADGRY VFEG