Gene Caci_4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4544 
Symbol 
ID8335898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5172288 
End bp5172935 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content71% 
IMG OID644957646 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003115248 
Protein GI256393684 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.796901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA CGCAGATGGC GATGATCAGT ATCAGTCAGG CCGCCGACGC GGCGGAGCCT 
CAGGATGAGG CAACACCCGG AAGCGCTTCG GCGCCGGCCG CCCGCGCCTC GATGCAGGCT
CTGTCCGCGG CACTACGCCG TGAGCGTCGG CGCGCCGACC TGAGCCTGAG CGAGGTGGCC
CGACGCGCCG ACTTGTCGAA GTCCACGCTG TCCCAGCTGG AGTCCGGGAT CGGGAATCCG
AGCCTGGAGA CACTGTGGGC ACTGTGCACG GCCCTGGGCA TCCCTTTCGG CCAGCTCTTC
GACCCCCCAC CGCCGCGTAC CCAGGTGATC CGTGCCGGGT CGGGCGCGGC GGTGGCCGCC
GAGCAAGCCG ACTATCGCGT ACTGCTACTG GCCACCTGCC CGCCGGGCGC GCGCCGGGAC
GTCTATCGTG TGGAGGCCGA GCCCGGATCG GTGCGCAGGT CCGATCCGCA CGCGCCCGGC
GTCGTGGAAC ACGTGGTGGT GTGCGCGGGG CGCGCGTTGG TAGGGGTGGC CGAGGAGCCG
GTGGAGCTGG GCCCGGGCGA CTACATCGTC TATCCCGGCG ACGTCCCGCA CCTGTTCGAG
GCATTGGAGC CCGGCACATG GGCGGTCACG GTGTCGGAGC ACGTGTGA
 
Protein sequence
MNRTQMAMIS ISQAADAAEP QDEATPGSAS APAARASMQA LSAALRRERR RADLSLSEVA 
RRADLSKSTL SQLESGIGNP SLETLWALCT ALGIPFGQLF DPPPPRTQVI RAGSGAAVAA
EQADYRVLLL ATCPPGARRD VYRVEAEPGS VRRSDPHAPG VVEHVVVCAG RALVGVAEEP
VELGPGDYIV YPGDVPHLFE ALEPGTWAVT VSEHV