Gene Caci_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4533 
Symbol 
ID8335887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5162780 
End bp5163664 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID644957635 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_003115237 
Protein GI256393673 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.441672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.86514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAACA ACCTGGCCAT ACGCCTGGAA CACGCTGTCG AGGCTGTCGG GAGGAACGAG 
TCGTTGGGAG GCGTCAGCGA CCGCTGGGCC GGCCTCGCCT CCACGCTGAC CCGGGACCGC
AAACTGAAGA GTCTGCTGTC CGGCAGCTGG TTGGGACATC CGCTCCACCC GTTGCTGACG
GACCTGCCGA TCGGTGCGTA CAGCATGGCC TCGATCATCG ATGTCACTGC TGGCGGCGCC
GGGGCCGCAG CTGCCCGCCG CCTGGTCGGG CTGGGGTTGA TCACCACGGT GCCGACCGCC
GCGGCTGGTG CTTCCGACTG GTCCGACACG CACGGTCCGA CTCAGCGGGT CGGTCTCGTG
CACGGCCTGC TGAATGTGAC GGCGACGCTC ACCCAGACCG CGTCGTGGGT AGCGCGACGC
CGTGGCCGGC GCGGGACCGG AATGGCGCTG AGCGGGCTGG GCCTCGGCCT CACGGCTGTC
GCCGCCTATT TGGGCGGCTA CCTGTCATAC AGCCGCGGTG TCGGCGTCGA CCACACCGCG
TTCCAGCCGA CCGTCGCCGA GTGGACCGAC GTCGCGGCGG CCGGGGACCT GACCGAGGAG
CACCCGCTGC GGGGTGAGGC CGATGGCGTG CCGGTGGTGC TGGTCAAGCT TCGGGGCGCC
GTATACGCGC TGTCCGCCAC CTGCACCCAC GCGGGCGGAC CGCTGGACGA GGGAATGATC
GTCGACGGCG ATTGCCTGCG CTGCCCCTGG CACGGAAGTG TCTTCCGGCT GGCCGACGGC
GGCGTGGTGC GCGGTCCTGC GGCGGCTGCC GAACCGTGCT GGGAGGTCAA GGTCGAGAAC
GAGCGGATCC AGGTGCGGTC CGCACAGCCT GCCGGGAATC CATGA
 
Protein sequence
MVNNLAIRLE HAVEAVGRNE SLGGVSDRWA GLASTLTRDR KLKSLLSGSW LGHPLHPLLT 
DLPIGAYSMA SIIDVTAGGA GAAAARRLVG LGLITTVPTA AAGASDWSDT HGPTQRVGLV
HGLLNVTATL TQTASWVARR RGRRGTGMAL SGLGLGLTAV AAYLGGYLSY SRGVGVDHTA
FQPTVAEWTD VAAAGDLTEE HPLRGEADGV PVVLVKLRGA VYALSATCTH AGGPLDEGMI
VDGDCLRCPW HGSVFRLADG GVVRGPAAAA EPCWEVKVEN ERIQVRSAQP AGNP