Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4533 |
Symbol | |
ID | 8335887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 5162780 |
End bp | 5163664 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957635 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_003115237 |
Protein GI | 256393673 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.441672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.86514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACA ACCTGGCCAT ACGCCTGGAA CACGCTGTCG AGGCTGTCGG GAGGAACGAG TCGTTGGGAG GCGTCAGCGA CCGCTGGGCC GGCCTCGCCT CCACGCTGAC CCGGGACCGC AAACTGAAGA GTCTGCTGTC CGGCAGCTGG TTGGGACATC CGCTCCACCC GTTGCTGACG GACCTGCCGA TCGGTGCGTA CAGCATGGCC TCGATCATCG ATGTCACTGC TGGCGGCGCC GGGGCCGCAG CTGCCCGCCG CCTGGTCGGG CTGGGGTTGA TCACCACGGT GCCGACCGCC GCGGCTGGTG CTTCCGACTG GTCCGACACG CACGGTCCGA CTCAGCGGGT CGGTCTCGTG CACGGCCTGC TGAATGTGAC GGCGACGCTC ACCCAGACCG CGTCGTGGGT AGCGCGACGC CGTGGCCGGC GCGGGACCGG AATGGCGCTG AGCGGGCTGG GCCTCGGCCT CACGGCTGTC GCCGCCTATT TGGGCGGCTA CCTGTCATAC AGCCGCGGTG TCGGCGTCGA CCACACCGCG TTCCAGCCGA CCGTCGCCGA GTGGACCGAC GTCGCGGCGG CCGGGGACCT GACCGAGGAG CACCCGCTGC GGGGTGAGGC CGATGGCGTG CCGGTGGTGC TGGTCAAGCT TCGGGGCGCC GTATACGCGC TGTCCGCCAC CTGCACCCAC GCGGGCGGAC CGCTGGACGA GGGAATGATC GTCGACGGCG ATTGCCTGCG CTGCCCCTGG CACGGAAGTG TCTTCCGGCT GGCCGACGGC GGCGTGGTGC GCGGTCCTGC GGCGGCTGCC GAACCGTGCT GGGAGGTCAA GGTCGAGAAC GAGCGGATCC AGGTGCGGTC CGCACAGCCT GCCGGGAATC CATGA
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Protein sequence | MVNNLAIRLE HAVEAVGRNE SLGGVSDRWA GLASTLTRDR KLKSLLSGSW LGHPLHPLLT DLPIGAYSMA SIIDVTAGGA GAAAARRLVG LGLITTVPTA AAGASDWSDT HGPTQRVGLV HGLLNVTATL TQTASWVARR RGRRGTGMAL SGLGLGLTAV AAYLGGYLSY SRGVGVDHTA FQPTVAEWTD VAAAGDLTEE HPLRGEADGV PVVLVKLRGA VYALSATCTH AGGPLDEGMI VDGDCLRCPW HGSVFRLADG GVVRGPAAAA EPCWEVKVEN ERIQVRSAQP AGNP
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