Gene Caci_4531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4531 
Symbol 
ID8335885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp5161675 
End bp5162082 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID644957633 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003115235 
Protein GI256393671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.556785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.468222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGAA GCGGATGGAC CGAACGAAGC CTGGTTTTGC CTCCGCAGGC GTCCGCGCCG 
CAGCTGGCCC GGGACTTCGT GGTGGAGACG GTTTCGGCGT GGCAGCTCCA GGAATCGGAA
GAGGCCGTAG CCCTCATCAC CAGCGAACTG GTCACCAACG CGGTGCGGCA CGCCGGCACC
GAGGTCACCG TGCGCATCCG GAAAGACGCC TCGGAGATCA CCATCGACGT GGCTGATGGA
GTGGCGGACC GAGTGCCCCG CGTCAGTTCC TCCGACGCTT CCATCCCAGG CGGGGTCGGT
CTGCTGATCG TCGGACGGCT GGCCGAGTCC TGGGGTGTGG AGAGGCGCCG GAACGGCAAG
TCCGTGTGGG TCAGGCTGGC TCTGGACAGC ACCGCCGATC GGCTCTGA
 
Protein sequence
MSGSGWTERS LVLPPQASAP QLARDFVVET VSAWQLQESE EAVALITSEL VTNAVRHAGT 
EVTVRIRKDA SEITIDVADG VADRVPRVSS SDASIPGGVG LLIVGRLAES WGVERRRNGK
SVWVRLALDS TADRL