| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4410 |
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| Symbol | |
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| ID | 8335764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5005707 |
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| End bp | 5006996 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644957513 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003115115 |
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| Protein GI | 256393551 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.164749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG CGAACCACTT GCTCGACCCC TCCGGAGCCC TTCCGCAGAC CCGACCCCCG
TGGACCTCCC GCGACAGCCT GCGGATCACC CGCGTGCGGG CGATCGTCAC CGCCCCCGAG
GGGCAGCCGC TCGTGGTGGT CCGCGTCGAC ACCTCCGACG ACGGCCTCTA CGGCCTGGGC
TGCGCCACCT TCACCCAGCG CTACGCCGCC GTGGCCGCCG CCGTCGACGA GCACGTCGGA
CCGCTGGCCG TCGGCCGCCA CCCGGCCGAC ATCGAGGACA TCACACGCCT GATTCACTAC
TCCTCGTACT GGCGCAGCGG ACCGGTGCTC AACAACGCGC TGTCCGGTCT GGACCAAGCG
CTGTGGGACA TCGCCGGCAA GCGCGCCGGC ATGCCGGTGT ACGAGCTGCT CGGCGGGCGC
AGCCGATCGG CGGTCGAGGT GTATTCGCAC GCTGCCGGCG GCACCATCGA GGCGACGCTC
GACCAGGCGG AGGAGCTGCT GGCCGAGGGC TACCGGAACG TGCGGCTCCA GCTCGGCGGT
CCGGGCCTGG GCACGTATGG CGCGCCCGGC ACGCTCGGCG GCTACCCGCG CTCGCCACAT
CCGGACGGCT GGGCCGTCGA GCAGTATCTG CGTGACGCGC CGCGGCTTTT CGCCGCTGCC
CGCGAGCGCC TTGGCGACAG CGTCAACCTG ATGCACGACG TGCACAGCCG CCTCACTCCG
AAGCAGGCCG TCGTGCTGGC GCGCGCCCTG GAGCCGTATC GGCTGTCGTT CCTTGAGGAC
GTCATCGCCC CCGAGCTCTA CGACCGGCTG CCCGAGGTGC GCGCCGCCTC GCCGGTACCG
ATCGCAGTGG GCGAACAGAT CGGCTCGGTG CCGGACGCGG TGCGGCTGGT GCGCGACGGC
GGCGTGGATC TGCTGCGCCT GCACACCTCC GCGGTCGGCG GGCTCACCCC GACCCGCAAG
ATCGTCGCGC TGTGCGAGCT GCTCGGCGTG CGCACCGCGT TCCACTCCCC GGCGGACGTC
TCGCCGGTCG GCGTCGCGGC GAACCTGGCC GTGGACATCT CGACCCCGGC GTTCGGCTAC
CAGGAGTCGC ACACCTACAA CGACGCCACG CACGAGGTTT TCCCGGGCAC GCGGGTCGTC
CGCGAGGGGC ACTTGTACCC CGCGGAGGAG CCGGGGTGGG GGATCGAGAT CGACGAGCGT
GCGGCGGCGA AGTTCCCGCC GGTGAAGTTC CTGCACGAGC GGTGGTCCTC GGGTGTGCGG
CGCCCCGACG GCGGGCTGGA GGCTCCGTGA
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| Protein sequence | MTDANHLLDP SGALPQTRPP WTSRDSLRIT RVRAIVTAPE GQPLVVVRVD TSDDGLYGLG
CATFTQRYAA VAAAVDEHVG PLAVGRHPAD IEDITRLIHY SSYWRSGPVL NNALSGLDQA
LWDIAGKRAG MPVYELLGGR SRSAVEVYSH AAGGTIEATL DQAEELLAEG YRNVRLQLGG
PGLGTYGAPG TLGGYPRSPH PDGWAVEQYL RDAPRLFAAA RERLGDSVNL MHDVHSRLTP
KQAVVLARAL EPYRLSFLED VIAPELYDRL PEVRAASPVP IAVGEQIGSV PDAVRLVRDG
GVDLLRLHTS AVGGLTPTRK IVALCELLGV RTAFHSPADV SPVGVAANLA VDISTPAFGY
QESHTYNDAT HEVFPGTRVV REGHLYPAEE PGWGIEIDER AAAKFPPVKF LHERWSSGVR
RPDGGLEAP
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