| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4361 |
|---|
| Symbol | |
|---|
| ID | 8335715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4948956 |
|---|
| End bp | 4949753 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644957464 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003115066 |
|---|
| Protein GI | 256393502 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.10188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCGG ACAACCTGTT GGGAGAGTTC CTGAAGGCTC GGCGGTCGCG GATCGCGCCG
TCGGACCGGG AGGTGGCGCT GTCCGGACGG CGCCGGGTCG CCGGGCTGCG GCGCGAGGAG
CTGGCGCGGC TGGCCGGGAT CAGCGAGCCG TATCTGACCC GGCTGGAGCA GGGCGTCGAC
CGGCATCCCT CGCCGCAGGT GCTCTCGGCG CTGGCTCGGG CGCTGGAGCT GGACGCCGAT
GCCTCCGCGC ACTTCTACGC GCTCGCGGCG CCGGACAGCG AGCCCTCCGC CGAGCCCGAG
GTCAGCGAGG ACGTGCACCG ACTGCTCGAC GCGTGGGCCG ACACTCCGGC TTACGTACGC
AACAGGCGTT TCGACGTGCT GGCCGCCAAC AAGCCGGCCA GGGCGCTGGC CGCGATGTAC
GAGCCGGGGC GCAACCTGGC GCGGGAGATG TTCTTCTCCG CGCAGGTGCG CCGGTTGTTG
CCGGATTGGC CGCAGATCGC GGAGCAGACC GTCGCGGCGC TGCGGGCGGA GGCTGACGTG
CGCGACCCGC AGACCGTTCA GCTCATTGCG GAGTTGGAGG GCGACGAGGA CTTCCGCCGC
CTGTGGGTGC GGCATGACGC GCGCCCTTCG CGTGACGAGC TCAAGCGGTT CGCGCATCCG
ATCGTCGGGG AGCTGGCGCT GCGGCGGCAG GCGCTGACCG TCGGCGGCGC CGAGCAGCAG
GTGATCATCG TGTACCAGGC GGCGCCCGGG AGTCCGTCCG CGGAGGCCCT CGCCCGGCTG
GTCATAGGCG GCAGCTGA
|
|---|
| Protein sequence | MGSDNLLGEF LKARRSRIAP SDREVALSGR RRVAGLRREE LARLAGISEP YLTRLEQGVD
RHPSPQVLSA LARALELDAD ASAHFYALAA PDSEPSAEPE VSEDVHRLLD AWADTPAYVR
NRRFDVLAAN KPARALAAMY EPGRNLAREM FFSAQVRRLL PDWPQIAEQT VAALRAEADV
RDPQTVQLIA ELEGDEDFRR LWVRHDARPS RDELKRFAHP IVGELALRRQ ALTVGGAEQQ
VIIVYQAAPG SPSAEALARL VIGGS
|
|---|
| |