Gene Caci_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4342 
Symbol 
ID8335696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4931229 
End bp4931771 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID644957445 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003115047 
Protein GI256393483 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.482582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CGAGTGGCCC GAGCAGCTCC CCGAGCGCGG ACGCGTTCCC CGTACCCGCT 
GACGAACGCT CCTTCGAGGA CTATCGGCCG GGCGCGGTGT ACGAGTTCGG CAGCGTGACG
GTGAGCGAGG AGGAGATCAT CGTCTTCGCG TCCCGATATG ATCCGCAATC CTTTCACGTC
GACCCGGTCG CCGCGGTTCA GGGACCCTTC GGCGGTCTGG TCGCCAGCGG CTGGCACACC
TGCGCGCTGA TGATGCGGCA GTTCGCCGAG CACTACCTGC CGACGGCCGC GAGCCTGGGC
AGCCCCGGCG TGGACGAGGT GCGCTGGCTC AAGCCGGTGC GCCCCGGCGA CCGCCTGCAC
CTGCGGCTCG AGGTGCTCGA CACCCGCCTG TCGCGCTCGG ACCCGCGGCG CGGGATCGTG
CGCACCTTCG CCGAATTGGT CGACGAGCTC GGCGAGCCGG TGCTGAGCAT GACGGTGGTG
AGCCTGATGC GCTCGCGCGA GGGCGCCGGG GAGCAGCCCG CGTCGCCGCC CGCGTCCGGG
TGA
 
Protein sequence
MSTPSGPSSS PSADAFPVPA DERSFEDYRP GAVYEFGSVT VSEEEIIVFA SRYDPQSFHV 
DPVAAVQGPF GGLVASGWHT CALMMRQFAE HYLPTAASLG SPGVDEVRWL KPVRPGDRLH
LRLEVLDTRL SRSDPRRGIV RTFAELVDEL GEPVLSMTVV SLMRSREGAG EQPASPPASG