Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4342 |
Symbol | |
ID | 8335696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4931229 |
End bp | 4931771 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644957445 |
Product | MaoC domain protein dehydratase |
Protein accession | YP_003115047 |
Protein GI | 256393483 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.482582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC CGAGTGGCCC GAGCAGCTCC CCGAGCGCGG ACGCGTTCCC CGTACCCGCT GACGAACGCT CCTTCGAGGA CTATCGGCCG GGCGCGGTGT ACGAGTTCGG CAGCGTGACG GTGAGCGAGG AGGAGATCAT CGTCTTCGCG TCCCGATATG ATCCGCAATC CTTTCACGTC GACCCGGTCG CCGCGGTTCA GGGACCCTTC GGCGGTCTGG TCGCCAGCGG CTGGCACACC TGCGCGCTGA TGATGCGGCA GTTCGCCGAG CACTACCTGC CGACGGCCGC GAGCCTGGGC AGCCCCGGCG TGGACGAGGT GCGCTGGCTC AAGCCGGTGC GCCCCGGCGA CCGCCTGCAC CTGCGGCTCG AGGTGCTCGA CACCCGCCTG TCGCGCTCGG ACCCGCGGCG CGGGATCGTG CGCACCTTCG CCGAATTGGT CGACGAGCTC GGCGAGCCGG TGCTGAGCAT GACGGTGGTG AGCCTGATGC GCTCGCGCGA GGGCGCCGGG GAGCAGCCCG CGTCGCCGCC CGCGTCCGGG TGA
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Protein sequence | MSTPSGPSSS PSADAFPVPA DERSFEDYRP GAVYEFGSVT VSEEEIIVFA SRYDPQSFHV DPVAAVQGPF GGLVASGWHT CALMMRQFAE HYLPTAASLG SPGVDEVRWL KPVRPGDRLH LRLEVLDTRL SRSDPRRGIV RTFAELVDEL GEPVLSMTVV SLMRSREGAG EQPASPPASG
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