Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4322 |
Symbol | |
ID | 8335676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4906757 |
End bp | 4907599 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957425 |
Product | peptidase M55 D-aminopeptidase |
Protein accession | YP_003115027 |
Protein GI | 256393463 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00711376 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATCT TCATCTCCTC CGACATGGAG GGCACCGCCG GGGTGGTCAA CTGGGACCAG TGCCGCCCCG GCCAGCACGA CTACGAGCAC TACCGCGCCC TGCTGCAGGA CGAGGTCAAC GCCGCGATCG ACGGCGCGAA CCGGGCCGGC GGACCCCACG AGTTCCTCGT CAACGACTCC CACGGCCGGA TGGCGAACCT GCGTCCCGAG CAGCTGCACG GAGAAGCCTC CTACCTGTCC GGGCACCACA AGCCGCTGTA CATGATGCAG GGCTTGGACG AGTCCTTCGA CGCGGTCTTC TTCGTGTCCT ACCACGGCTC GGCGTCCGGC AGCCCGGCAA CGCTGTCCCA CACCTACAAC CCGGCGGCGA TCGCCGAGGT CAGGCTCAAC GGCGCGCTCG CCGGGGAGTC CGGCATCAAC TCGCTGGTCG CCCACAGCCT CAACGTCCCG GTGGTGTTGG TGACCGGCGA CCAGACGACC GCCAGCGAAC TGCGGCCGTT CTGGCCCGAA GCCCGCGCCG CCGTGGTCAA GCAGTCGGTC TCACGCTTCG CCGCCGAGAG CCTCCATCCA GCGCGCGCCA CCCGGCTCAT CGAGGAGACG GCACGGGAGG CGATCACCGC ATTGCGGGAA TCCGGCAGCG CACCCGCCGC CCACATCGAG ACTCCCTCGG TCCTCACAGT CCGCCTCCGT AACCCAGACC TCGCCGAGAT GGCGACGTGG CTGGAACGCG TCGAGCCCGA CAACACGGAC CCGACCGTCG TCCACCTCGC CGACGACGAT CTCCTGCGCC TCTACCGCAC TTTCATCACG CTGGTCGTGC TCACCCGGGG CATCGCCGAG TAG
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Protein sequence | MKIFISSDME GTAGVVNWDQ CRPGQHDYEH YRALLQDEVN AAIDGANRAG GPHEFLVNDS HGRMANLRPE QLHGEASYLS GHHKPLYMMQ GLDESFDAVF FVSYHGSASG SPATLSHTYN PAAIAEVRLN GALAGESGIN SLVAHSLNVP VVLVTGDQTT ASELRPFWPE ARAAVVKQSV SRFAAESLHP ARATRLIEET AREAITALRE SGSAPAAHIE TPSVLTVRLR NPDLAEMATW LERVEPDNTD PTVVHLADDD LLRLYRTFIT LVVLTRGIAE
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