Gene Caci_4322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4322 
Symbol 
ID8335676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4906757 
End bp4907599 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID644957425 
Productpeptidase M55 D-aminopeptidase 
Protein accessionYP_003115027 
Protein GI256393463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2362] D-aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00711376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATCT TCATCTCCTC CGACATGGAG GGCACCGCCG GGGTGGTCAA CTGGGACCAG 
TGCCGCCCCG GCCAGCACGA CTACGAGCAC TACCGCGCCC TGCTGCAGGA CGAGGTCAAC
GCCGCGATCG ACGGCGCGAA CCGGGCCGGC GGACCCCACG AGTTCCTCGT CAACGACTCC
CACGGCCGGA TGGCGAACCT GCGTCCCGAG CAGCTGCACG GAGAAGCCTC CTACCTGTCC
GGGCACCACA AGCCGCTGTA CATGATGCAG GGCTTGGACG AGTCCTTCGA CGCGGTCTTC
TTCGTGTCCT ACCACGGCTC GGCGTCCGGC AGCCCGGCAA CGCTGTCCCA CACCTACAAC
CCGGCGGCGA TCGCCGAGGT CAGGCTCAAC GGCGCGCTCG CCGGGGAGTC CGGCATCAAC
TCGCTGGTCG CCCACAGCCT CAACGTCCCG GTGGTGTTGG TGACCGGCGA CCAGACGACC
GCCAGCGAAC TGCGGCCGTT CTGGCCCGAA GCCCGCGCCG CCGTGGTCAA GCAGTCGGTC
TCACGCTTCG CCGCCGAGAG CCTCCATCCA GCGCGCGCCA CCCGGCTCAT CGAGGAGACG
GCACGGGAGG CGATCACCGC ATTGCGGGAA TCCGGCAGCG CACCCGCCGC CCACATCGAG
ACTCCCTCGG TCCTCACAGT CCGCCTCCGT AACCCAGACC TCGCCGAGAT GGCGACGTGG
CTGGAACGCG TCGAGCCCGA CAACACGGAC CCGACCGTCG TCCACCTCGC CGACGACGAT
CTCCTGCGCC TCTACCGCAC TTTCATCACG CTGGTCGTGC TCACCCGGGG CATCGCCGAG
TAG
 
Protein sequence
MKIFISSDME GTAGVVNWDQ CRPGQHDYEH YRALLQDEVN AAIDGANRAG GPHEFLVNDS 
HGRMANLRPE QLHGEASYLS GHHKPLYMMQ GLDESFDAVF FVSYHGSASG SPATLSHTYN
PAAIAEVRLN GALAGESGIN SLVAHSLNVP VVLVTGDQTT ASELRPFWPE ARAAVVKQSV
SRFAAESLHP ARATRLIEET AREAITALRE SGSAPAAHIE TPSVLTVRLR NPDLAEMATW
LERVEPDNTD PTVVHLADDD LLRLYRTFIT LVVLTRGIAE