Gene Caci_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4296 
Symbol 
ID8335650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4874529 
End bp4875551 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID644957399 
ProductSiderophore-interacting protein 
Protein accessionYP_003115001 
Protein GI256393437 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000530029 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCGT CCTCCTCAGT GACCGCGGTG CTGGCCGCCT CGGCGGCGGC TTCGGCGATC 
TCCTCGGTCG CGCCGTCCCC AGCGCTGTTC GCCGAAACCG CGTCGGCCTC GCCGCTCGTG
CACGGCGCAT TCCGCTTCTT CCAAGCGCGC GTGCTCGCCA CCCGGCGGCT GGGACCGTCG
ATGATCCGCG TCACGTTCGG CGGCGAGCAG CTGCGCGATT TCGACGGCGG CGGCCGGGAC
CAGAGCTTCT CGCTGTTCCT CCCGCAGCCG GGACAGTACG CGCCATCAGT CCCCTTCGAT
GCCGGAGACG ACTGGTTCGC GCAGTGGCGG GCGACGCCGG AGGACGAGCG GGCCATCATG
CGCTCCTACA CCGTCCGCTC CCAGGACCGC GAGCACGACG AGGTGGACGT CGATTTCGTG
GTGCACGGCA CCGGTAACTC GTCGTCCACT CCGGCTGGAC CGGCGTCACG CTGGGCTGCC
GAAGCGGTGC CCGGGGACCG GGTCGTGCTG CTCGGACCGG CGTTCGCGGA CAACCGCAGT
ATCGGCTTCC AGCTACCGGA GCAGACCGAC TGGGTCCTGA TCGCCGCCGA CGAGACCGCG
CTTCCGGCCG CCGCCGCGAT CCTGGAATGG CTGCCGGACG GTCTGCGCGC CCGAGCCTGG
ATCGAGGTCC CGGATCTGAA GGACACCCAG GAACTGGTCA GCGCCGCCGA CGCCGACATC
ACCTGGCTGG TCCGCGACAC GGCACGGCGT CCTGGAGCCT TGCTGATCGA GGAGATTCAG
GGCGCGGCCT TCCCCGACGG AGCGCCGTAC GCCTGGCTCG CCGGAGAGTC CGGGATGGTC
AAGACCCTGC GACGCCACCT GGTCGGCGAG CGCGGCATCG ACCGCAGACT CGTGGAGTTC
TCCGGGTACT GGCGCTTGGG TGCGACCGAG GAGGATCTGC GGACTGAGAA GATCTCCGCA
GCCGAAAGCA CAGCAACCGA AAGCTCTGAA GCAGCCGCGC AGAACGCGGA GGAAGCTCTG
TGA
 
Protein sequence
MTSSSSVTAV LAASAAASAI SSVAPSPALF AETASASPLV HGAFRFFQAR VLATRRLGPS 
MIRVTFGGEQ LRDFDGGGRD QSFSLFLPQP GQYAPSVPFD AGDDWFAQWR ATPEDERAIM
RSYTVRSQDR EHDEVDVDFV VHGTGNSSST PAGPASRWAA EAVPGDRVVL LGPAFADNRS
IGFQLPEQTD WVLIAADETA LPAAAAILEW LPDGLRARAW IEVPDLKDTQ ELVSAADADI
TWLVRDTARR PGALLIEEIQ GAAFPDGAPY AWLAGESGMV KTLRRHLVGE RGIDRRLVEF
SGYWRLGATE EDLRTEKISA AESTATESSE AAAQNAEEAL