| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4295 |
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| Symbol | |
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| ID | 8335649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4873006 |
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| End bp | 4874532 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644957398 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003115000 |
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| Protein GI | 256393436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000243421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCCCTC AGGCCTCCGC CGTCGCGACC GCGCGCGCCA TCTTCTCCCC CACCGTGGAT
GACGCCGCCC GCCACCTGTT CAACGACCGG ACCCTGGACC GCTATCGGCA CACCATGGCC
GACGGCGTCG AGCGCATTGC CGACCGCATA GCCCGCACCG ATCGTCCGTT CACCGGCGTC
TCCCCCGACG ATCTCACCCC GGGCATATCA GGCATCGATC TCGACCGTCC GCTCGAGGAC
ACGGCCGCGG CGCTGGACGA GCTCGAAGAC GTCTACCTGC GCGACGCCGT CTACTTCCAC
CACCCGCGCT ACCTCGCACA CCTGAACTGC CCGGTGGTCA TCCCGGCGCT GCTCGGCGAG
GCGGTCCTCA CCGCGGTCAA CTCCTCGCTG GACACCTGGG ACCAGAGCGC CGGCGGCACG
CTGATCGAGC GCCGGCTGAT CGACTGGACC GCCGGACGGA TCGGCTTCGG GACGTCCGCC
GACGGCATCT TCACCAGCGG CGGCAGCCAG TCGAACTTCC AGGCGCTGCT GCTGGCTCGG
GAAGAAGCCT TGGCGAAAGC GGCGCTCGGC GCCTCCCGCG ACGTCATGGA CCGGCTTCGC
ATCTTCGTCT CCGAAGCCGG GCACTTCAGC GTCCGCAAGT CGGCGAAGAT GCTCGGGCTG
AGCCCGGACG CCGTGGTCAC CGTCGAGACC GACGCCCGCA AGCGGATGCG TCCGCAGGCG
CTGGCGTGGG AGCTGGAGCA GTGCCGCTGG GCCGGGTTCA TCCCGATGGC GATCGTGGCC
ACCGCCGGGA CGACCGACTT CGGATCCATC GACCCGCTGC CGGCGATCGC GAGGCTGTGC
GCGGACTCTG GCGCCTGGTT CCACGTCGAT GCCGCGTATG GCTGTGGTCT GCTCGTCTCC
CGCTCCCGGC GCGCTCTGCT CAACGGCATC GAGCGCGCCG ACTCGGTCAC CGTGGACTTC
CACAAGTCCT TCTTCCAGCC GGTCAGCTCC AGTGCCCTCG TGGTGCGCGA GCGCGCGACC
CTGTCCCACG CGACCTACCA CGCCGACTAC CTCAACCCGG CCCGCATGGT CGAGCAGCGC
ATCCCCAACC AGGTCGACAA GAGCATCCAG ACCACGCGCC GCTTCGACGC GCTCAAGCTC
TGGATGACGC TGCGGATCAT GGGTCCGGAC GCCGTCGGCG ACCTGTTCGA CGAGGTCATC
GACCGTGCCG CGCAAGCCTG GGTCCTGCTC ACCGTCGATC CCCGGTTCGA GGTGGTGACG
CGCTCGCAAC TCAGCACACT GGTGTTCCGC TACCTGCCGC CGGAGGGCGC GACGCGGGAC
CTGGCCGACG GCGCGAACCT GTATGCCCGC GAAGCGTTGG CTTCCTCCGG CGCGGCGCTG
GTCGCCGGGA CCAAGGTCGG CGACCGGCAC TACCTGAAGT TCACCCTGCT GAACCCCGAG
ACCACGGTGG ACGACATCGC GCACGTCCTG GACCTGATCG CGGACCACGC AGCCGAATAC
GTCGAGCGCC GGAGAAGGAC CTCGTGA
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| Protein sequence | MSPQASAVAT ARAIFSPTVD DAARHLFNDR TLDRYRHTMA DGVERIADRI ARTDRPFTGV
SPDDLTPGIS GIDLDRPLED TAAALDELED VYLRDAVYFH HPRYLAHLNC PVVIPALLGE
AVLTAVNSSL DTWDQSAGGT LIERRLIDWT AGRIGFGTSA DGIFTSGGSQ SNFQALLLAR
EEALAKAALG ASRDVMDRLR IFVSEAGHFS VRKSAKMLGL SPDAVVTVET DARKRMRPQA
LAWELEQCRW AGFIPMAIVA TAGTTDFGSI DPLPAIARLC ADSGAWFHVD AAYGCGLLVS
RSRRALLNGI ERADSVTVDF HKSFFQPVSS SALVVRERAT LSHATYHADY LNPARMVEQR
IPNQVDKSIQ TTRRFDALKL WMTLRIMGPD AVGDLFDEVI DRAAQAWVLL TVDPRFEVVT
RSQLSTLVFR YLPPEGATRD LADGANLYAR EALASSGAAL VAGTKVGDRH YLKFTLLNPE
TTVDDIAHVL DLIADHAAEY VERRRRTS
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