Gene Caci_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4268 
Symbol 
ID8335622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4844407 
End bp4845180 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID644957371 
Productprotein of unknown function DUF1365 
Protein accessionYP_003114973 
Protein GI256393409 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.509599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.624218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCGG CGGCTTTGTA CGAGTGCCGG ATCCGGCATG TGCGGCGCGG CGCTGTCGCG 
AACGACTTCA CGTACGGCTC GTACTTGTGG CTGGTCGATC TCGACGATTT GCCTCGCTTA
CCGGGTCCGC TGAGGGCGCT CGCCGGGTTC GTCCCCGGTG ATCACTTCAC CGGGACCGAC
ATCAGCATCC GCGCGGGTCT TGAGGACTTC CTCGCCGATC GCGGCGTGTT CCTCGACGGT
GGCAGGGTGC TGATGCTGAC GGCGGCGCGG GTGTTCGGGT ACGTGTTCAA CCCGCTGACC
GTCTACTGGT GCCGCGACGC CGACGACCAG CTGGTCTGCG TCGTCGCGGA AGTGCACAAC
ACGTATGGCG GACGGCACTC CTACCTGCTC TTTCCTGACG AGAGCGGTCG GGCTGACGTC
GCCAAGGACT TCTACGTCTC GCCGTTCCTG CCGATCGACG GCGGTGTCTA CCGGATGCGG
GTTCCGGAGC CCGATGAGCG GCTGAGCATC TCGATCCGGC TGGATCTGCC CGGTGGTGCG
CCGCCGTTCG TGGCGAGCGT GCACGGGGTG CGGCGGGTCG CTACCGCTAG GGAGCTGTTG
CGGATGGTTG CGCGCCATCC GCTGGCGCCG CTCGCGGTCG CGGGACGGAT TCGGCGGCAG
GGCGTCGCGC TGTTTTTGCG CGGGCTGCCG GTGGTGCCTC GGCCTCGGCC TCGGCCTGGC
GCTAAGTCGG ATATGGCGGC TGAGGCGACT ATGGCAAAGA CCGGAGGACG TTGA
 
Protein sequence
MSAAALYECR IRHVRRGAVA NDFTYGSYLW LVDLDDLPRL PGPLRALAGF VPGDHFTGTD 
ISIRAGLEDF LADRGVFLDG GRVLMLTAAR VFGYVFNPLT VYWCRDADDQ LVCVVAEVHN
TYGGRHSYLL FPDESGRADV AKDFYVSPFL PIDGGVYRMR VPEPDERLSI SIRLDLPGGA
PPFVASVHGV RRVATARELL RMVARHPLAP LAVAGRIRRQ GVALFLRGLP VVPRPRPRPG
AKSDMAAEAT MAKTGGR