| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4253 |
|---|
| Symbol | |
|---|
| ID | 8335607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4828475 |
|---|
| End bp | 4829554 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644957356 |
|---|
| Product | Membrane dipeptidase |
|---|
| Protein accession | YP_003114958 |
|---|
| Protein GI | 256393394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.655109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.32173 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACAA CTGAAGGCCT CGACGCCTCG ACGCTGGAGC TGCACCGGCG CGTGGTGGTT
GCCGATACCC ACAATGACCT GCTCTGCTCG GTCGTGCTGC GGCCGGTGGC GCAGTGGTCC
GATTACTTCC GCGCGCAATG GTTGCCGCAG TTGCGGGCCG GCGGCGTGGA CGTTCAGGTG
CTGCCGGTGT TCATCGATGA CTCCTTCCGT CCTGAAGGTG CTCTGCGCCA GACGTTGCGG
ATGATCGAGG CGGCGCACCG GATTGCCGAG GGCAACGCCG ATGAGGTCAG CCTGTGCCTG
GATGGCGCCG ACATCGATCG CGCCCTGGAC GCCGGGCGGA TCGCGCTGGT CCTCGCGCTG
GAAAGCGCAC CTGGCATCGA CGCCGACATC GAACTGCTCA CCACCTTGTA CCGCCTCGGT
GTCCGCATCG CCTCCCTAGC GCACTTCGGG CGCACGCCGC TCGCTGACGG CTCGGCGGAG
GACGCGGCCG GGAGCCGGCT CACCGCTGCC GGCGTCGAGG CGTTCGCGGA GATGGAACGC
ATGGGCATGG TGTTCGACGT CTCCCACCTC GGTGCGGCGG GCGTGGACCA TGTCCTGGAG
TTGGCGACCC GGCCGCTGCT CGCCACGCAT TCCTCCGCTC GCGCGCTGTG CGACCACCAC
CGCAACCTCA CCGACGCGCG CCTGGCGGCC ATCGCGGCCG GTGGCGGCGT GGTCTGCGTG
AACTTCTTTC CCGGCTTCGT CGATGCCCAC GAGCCCTCCG TGTCCCGCCT CGTCGACCAC
ATCGAGCACA TCGGCAAGGT CGCCGGTACC GACCATGTCG GCATCGGGCC GGACTTCGTC
GTCGAGGTGC TGCGCGACGT GACGCCTGGC GGCGTGGAGA TCGGCCTGAT GGCCGGCTGC
GATCCGTTCG ACACGCTGCC GGGACTGCCC GGACCTGCGG GATTGCCGCT GCTCACCGCC
GAACTGCTGG CCCGAGGCGT GGACGAGGCA GTGATCGCCG CGACGCTCGG TGGCAATGTC
CTGCGACTGT TCCGCGCCGA GCTCGGCGTG CCCGCGGAGC GTCGGGGAGC CGCCGCGTGA
|
|---|
| Protein sequence | MGTTEGLDAS TLELHRRVVV ADTHNDLLCS VVLRPVAQWS DYFRAQWLPQ LRAGGVDVQV
LPVFIDDSFR PEGALRQTLR MIEAAHRIAE GNADEVSLCL DGADIDRALD AGRIALVLAL
ESAPGIDADI ELLTTLYRLG VRIASLAHFG RTPLADGSAE DAAGSRLTAA GVEAFAEMER
MGMVFDVSHL GAAGVDHVLE LATRPLLATH SSARALCDHH RNLTDARLAA IAAGGGVVCV
NFFPGFVDAH EPSVSRLVDH IEHIGKVAGT DHVGIGPDFV VEVLRDVTPG GVEIGLMAGC
DPFDTLPGLP GPAGLPLLTA ELLARGVDEA VIAATLGGNV LRLFRAELGV PAERRGAAA
|
|---|
| |