Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4250 |
Symbol | |
ID | 8335604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4823901 |
End bp | 4825760 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957353 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_003114955 |
Protein GI | 256393391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.210666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGGA TAACCGGCTG GATCTCCTAC GAGCGGGACC TGCGTGCCGA GGCGGACATC CTGGACCGGA TGACGGCCAC CATGGACTGC CGCGGCCCGG ACGACCGCGG TACCTGGATC GACGGTCCCG CCGGGCTCGG GCACCGCCGA CTGGCCATCA TCGACCTGCC CGGCGGCCGG CAGCCGATGA CCGCCGAGGC GGGCGGGGAC ATTGCCGGGA AGCAGAGCAT AGTGATCGTC TACTCCGGCG AGACGTACAA CTACACCGAG CTGCGCGCCG AGCTGGCCTC GCGCGGGCAC CGCTTCAGCA CAGAGTCCGA CACCGAGGTC GTGCTGCGCG GCTACATCGA GTGGGGCGCG GCGGTCGCCG AACGGCTGAA CGGGATGTAC GCCTTCGCGA TCTGGGACGG TCGGGACCGC AAGCTGCGCC TCGTCCGCGA CCGCATGGGA ATCAAGCCTC TGTATTACTC GCCGACGCCC GACGGAGTGT TGTTCGGCTC CGAGCCCAAG GCGATCCTGG CCAATCCGTT GGCGCGGCGC GCGGTCGGGC TGGACGGACT GCGCGAGCTG TTCGTGATGG TCAAGACTCC AGGGCACGCG TTCTGGGACG GGATGCGCGA GGTCGAGCCG GGCACTGTGG TCACTATCAG CCCCGAAGGC GTGCGCACCG ACGTGTACTG GACGCTGGAG ACCCGCGAGC ACACCGACGA CCGCGACGCC AGCGTCGCGC ATGTCAGGGA GCTGCTGGAC GACATCGTGC GGCGCCAACT GGTCGCCGAC GTCCCGCGCT GCGTCCTGCT CTCCGGCGGC TTGGACTCCT CTACTCTCAC TGCGCTTTCC GCCCAGCAGC TTGCTGAGAC AGGGCAGAAG ATCCGCAGCT TCGCTGTGGA CTTCGTCGGG CAGGCGAAGA ACTTCGTGCC CGACCCGATC CGCGCCGACC CCGACACCCC CTTCGTGCAC GCGGTCGCCG AGCACTCCGG GACCGTCCAC CAGGACATCG TGCTGGACGC CGAGGCGCTC ACGGACCTGG ACGCGCGGCG CACCGTGATC CGGGCCCGCG ACATGCCCGC CGGCCTCGGG GACATGGACA CCTCCTTGTA TCTGTTGTTC AAGGAGATCC GCGACCACTC CACGGTCGCG CTGTCCGGGG AGTCCGCCGA CGAGGTGTTC GGCGGCTACC AGGACTTCTT CAACGAGGAC GCCCGGCGCG GCGGCACGTT CCCCTGGCTG GTGAAGTTCG TCGAGAACTT CGGCGACGAC CTGTCGCTGC TGCGTCCAGA ACTTCAGCAG GCGATGGATC TGCCCACCTA CGTCGCGGAC TGCTACCAGA CGGCGGTGGC GACGATCGAG CGCCTGCCGG GGGAGAGCGA CTTCGAGTTC GGGATGCGGC GGGTCTGCCA CCTGTACCTG ACGCGCTTCG TGCGCTTCCT GCTGGACCGC AAGGACCGGC TGAGCATGGC GGTCGGGCTG GAGGTGCGCG TCCCGTTCTG CGACCACCGG CTCGTGGAGT ACGTGTACAA CGCGCCGTGG GCGATCAAGT CCTTCGACGG CCGCGAGAAG TCGTTGCTGC GCGAGGCGGC GGCCGACGTC CTGCCGCGCT CGGTCTACGA CCGGGTGAAG AGCCCTTATC CGTCCACCCA GGACCCCCGG TACGCCATCG CCCTGCGCGC CCGGGTCGCC GATCTGCTGG CGCAGCCCTC GCACCGGGTG TTCGACCTCG TCGACCCGGT CGCGGTGCGC CGGATGGTCG ACGACTCCGG ACCGGCGATC ATGCAGGCGG GTCGCCGGGG GTTGGAACGC ACGCTGGATC TGGCGCTGTG GTTCGAGATG TACCAGCCGG AGGTGTCGCT GACGGTCTGA
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Protein sequence | MCGITGWISY ERDLRAEADI LDRMTATMDC RGPDDRGTWI DGPAGLGHRR LAIIDLPGGR QPMTAEAGGD IAGKQSIVIV YSGETYNYTE LRAELASRGH RFSTESDTEV VLRGYIEWGA AVAERLNGMY AFAIWDGRDR KLRLVRDRMG IKPLYYSPTP DGVLFGSEPK AILANPLARR AVGLDGLREL FVMVKTPGHA FWDGMREVEP GTVVTISPEG VRTDVYWTLE TREHTDDRDA SVAHVRELLD DIVRRQLVAD VPRCVLLSGG LDSSTLTALS AQQLAETGQK IRSFAVDFVG QAKNFVPDPI RADPDTPFVH AVAEHSGTVH QDIVLDAEAL TDLDARRTVI RARDMPAGLG DMDTSLYLLF KEIRDHSTVA LSGESADEVF GGYQDFFNED ARRGGTFPWL VKFVENFGDD LSLLRPELQQ AMDLPTYVAD CYQTAVATIE RLPGESDFEF GMRRVCHLYL TRFVRFLLDR KDRLSMAVGL EVRVPFCDHR LVEYVYNAPW AIKSFDGREK SLLREAAADV LPRSVYDRVK SPYPSTQDPR YAIALRARVA DLLAQPSHRV FDLVDPVAVR RMVDDSGPAI MQAGRRGLER TLDLALWFEM YQPEVSLTV
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