| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4236 |
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| Symbol | |
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| ID | 8335590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4803024 |
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| End bp | 4805741 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644957339 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114941 |
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| Protein GI | 256393377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.427598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.524249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTGC TTGGGCGACG CGCCGAATGC GCGCACCTGG ACGCGCTGTT CAAGACGATG
CGTGACGGCG GCAGCGACGT GCTCCTGCTC TCCGGCGAGG CCGGCATCGG CAAGACCGCG
CTGCTCGACT ATGCCGTGCG TGCCGCCGCG GACCTGCGGA TCCTGCGAAC CTCCGGCGTC
GAGTCCGAGA TGGACCTTCC CTACGCCGCC CTGCACCGCC TGTGCCTGCC GCTGCTCGAC
GGTGTCGACC ACCTGCCCGC GCCCCAGGCT GAGGCGCTGG CGACGGTCTT CGGGACGCGT
GCCGGTGAGA CACCTGGTCC GTTCCTGGTC GGTCTCGGCG TCCTCAACCT GCTCGCTGAG
GCGGCGCGCG GCGGTCCGCT GCTGTGCGCG GTGGACGACG CGCACTGGCT CGACGACGCC
TCCGCGCAGG CCATCGCCTT CGTCGCGCGC CGGCTGCGCG CCGAGTCGAT CCTGATGCTG
ATCACCAGCC GCGGCCCGAT CCCGAGCATG CGCGGGCTCG CCGAGTTCGG CGTGGAAGGC
CTGGCGCCGA CTGCCGCCGG CGAGCTGCTG GACTCCGTGG TGCGCTGGCC GCTGGACGAC
GGCGTCCGCG CCGCGATCCT CGCCGAGGCA CGCGGCAATC CGCTGGCGCT GCTGGAACTC
CCGCTCGCCT CGCCCGACCG GCTCGCCGGC GGCTTCGGGC TGCTGGAAGC CACGGCGCTC
ACCGGACGCA TCGAGGAGAG CTTCCAGCGC CGGATCTCCG AGCTGCCCGC GGACTCCCAG
GAGCTGCTGC TGCTCGCCGC CGCCGAATCG GCCGGCGATC CGGTGCTGAT CTGGCGTGCC
GCCGCAGTGC TCGGACTGAG TCCGGAGGCC GGGGGAGCGT GCCAGGACGC CGAACTGCTC
ACGATCGGCG TGCGCTTCGC CTTCCGGCAT CCGCTGGTGC GCTCGGCGGT GTACCACGCG
GCGTCGCCGG ACGCCCGGCG CCGGGTGCAC CGGGTCCTGG CCGAGGCGAC GTCCCGCGAA
GCCGACCCCG ACCGGCGTGC CTGGCATCTG GCTCAGGCTG CTGAGAAGCA GGACGAGGCG
GTCGCCGCCG AGCTGGAGGC GTCGGCGGAT CGCGCGCAGT CCCGGGGCGG GCTGGCTGCC
GCCGCCGCGT TCCTGGAGCG TGCCGCAGCC CTGACACCGG ACCCGGTACG GCGTGCCGAA
CGAGAACTGC TCGCCGCGCG CGACAAATAC CACGCCGGTG CTCCGGAGGG GGCGCAGATC
CTGCTGGACA AGGTGGAATC CGGTCCGCCG GACGAGCTGC GCTCGGCGCA CGTCCGGCAG
CTGCGCGGCC ACCTGGCGTT CGTCACCGGC GGCGCGGTCC GTGCCCCGAG CCTGCTGTTG
GAGGCGGCGC GGCGCTTCGA AGGCCTCGAT CCGGTCCTGG CGCGCGAGAC CTACCTGGAC
GCCATCATCT ATTCGCTGCG GACCGGCAGG TTCGCCGAGG GCGTCACGGT CACCGAGGTG
GCCAGGGCCG CGGTCGCCGC GCCGGTCCCG TCCTCGCCGC CGCGAGCTCG GGACGTCCTG
CTGGACGCGT TCGCGGTGCT GTACACCGAC GGTCACGTCA AGGGCGTGCC TTTGGTGCGG
CAGGCGCTGG AGGGCTTCAC GCTGGAGGGA CTGTCCGTCA CGCAGGCGAC GCGGTGGTTG
TCGCTGGCTT GCTACGGAGC TTTCGCAACG TGGGATGACG TGGCGTGGGA GAAGCTCTCG
CAGGAGAACG TCCGCCACAT CCGGGAAACC GGAGCGCTGG GCATGCTGCC GGTCGCGCAC
TCCCAGCGGA TGCTGGCGCA CCTGCACGCC GGACAGTACC AGGCCGCTGC CGATCTGCTG
GAGGAGTCCG ACGCCATCGT CGCGGCGATC GGCGTGGACC GTCCCGCCTA CGACGTGGCG
GCGGTGGCGG CGTGGCGCGG TCAGGACGAA CAGGCCACTG AGCTGCTGCG CATCGCTGAG
AACGCCGCCG CCGAACGGCG CGACGGCAAC GGGTTCACCT TCGTGAAGTA CGCCTTCGCG
GTCATGTACA ACGGCCTCGG CCGCTTCGCC GAGGCGCGCG AGGCAGCACT GGCCGCCGCC
GCGAGCCCGA CGGGATCGGC GTTCGCGTTC TGGGCACTGA GCGAACTCGT CGAGGCGGCG
CTCCGCTGCG GCGACCGAGC CCAAGCCGAG CAGGCGATGG AACAGCTCTC GACGACCACC
GCACCCAGCG CGACCGACTG GGGTCTGGGC ACCGAGGCGC GAGCACGTGC CCTGCTCAGC
GACGGCGCCG AGGCCGAGGC GCACTACCGG GAGGCGATCG ACCGGCTCGG GCGCAGCCGC
GGCGTGGTCG ACCTGGCGCG CACCCATCTT CTCTACGGCG AATGGCTACG CCGGCAGGAC
CGGACCGCCG ACGCCCAGGA GCAGTTGAGC ACCGCGCACA CCCGGTTCGT ACAGATCGGC
GCCGAAGCCT ACGCCGACCG CGCCCGCCGC GAACTCGCCG CCTGCGGAAT CGCGGTCGCC
GGTCCCACCG CCCAGAAGAC GCTCGAACTG ACCGAGCAAG AACGCCAGAT CGCCCGCCGA
GCCCGCGACG GCCGTTCGAA CACTGAGATC GGCGTCGAGC TGTTCCTCAG CGCCCGCACG
GTCGAGTGGC ATCTTCGGAA AGTGTTCAGC AAGCTGGGTA TCAGCTCACG GAGGGAGCTA
CGGACGGTGC TTCCGTAG
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| Protein sequence | MKLLGRRAEC AHLDALFKTM RDGGSDVLLL SGEAGIGKTA LLDYAVRAAA DLRILRTSGV
ESEMDLPYAA LHRLCLPLLD GVDHLPAPQA EALATVFGTR AGETPGPFLV GLGVLNLLAE
AARGGPLLCA VDDAHWLDDA SAQAIAFVAR RLRAESILML ITSRGPIPSM RGLAEFGVEG
LAPTAAGELL DSVVRWPLDD GVRAAILAEA RGNPLALLEL PLASPDRLAG GFGLLEATAL
TGRIEESFQR RISELPADSQ ELLLLAAAES AGDPVLIWRA AAVLGLSPEA GGACQDAELL
TIGVRFAFRH PLVRSAVYHA ASPDARRRVH RVLAEATSRE ADPDRRAWHL AQAAEKQDEA
VAAELEASAD RAQSRGGLAA AAAFLERAAA LTPDPVRRAE RELLAARDKY HAGAPEGAQI
LLDKVESGPP DELRSAHVRQ LRGHLAFVTG GAVRAPSLLL EAARRFEGLD PVLARETYLD
AIIYSLRTGR FAEGVTVTEV ARAAVAAPVP SSPPRARDVL LDAFAVLYTD GHVKGVPLVR
QALEGFTLEG LSVTQATRWL SLACYGAFAT WDDVAWEKLS QENVRHIRET GALGMLPVAH
SQRMLAHLHA GQYQAAADLL EESDAIVAAI GVDRPAYDVA AVAAWRGQDE QATELLRIAE
NAAAERRDGN GFTFVKYAFA VMYNGLGRFA EAREAALAAA ASPTGSAFAF WALSELVEAA
LRCGDRAQAE QAMEQLSTTT APSATDWGLG TEARARALLS DGAEAEAHYR EAIDRLGRSR
GVVDLARTHL LYGEWLRRQD RTADAQEQLS TAHTRFVQIG AEAYADRARR ELAACGIAVA
GPTAQKTLEL TEQERQIARR ARDGRSNTEI GVELFLSART VEWHLRKVFS KLGISSRREL
RTVLP
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