Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_4189 |
Symbol | |
ID | 8335543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4743530 |
End bp | 4744993 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644957292 |
Product | hypothetical protein |
Protein accession | YP_003114894 |
Protein GI | 256393330 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.154141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCG TCCTGTCGGC GTTCGGCTCG GCGGTCTGGA TCGAGCACCG CGCACACCTG CACCTCGACA TCGTCATCGC CGCCGTGGCG ATGACGATGA TCCTGGGACG CGTCCAGCGC GGCGCCCATC CCGGCGACCG GCTGATCGGC ACGGCGGTCC TGGTCGCGTC GGCGGCGAGC GCATCGGAAG TCAGTTCCCT GCTCCACCGC TTCCCGCTGT TCGGCGACGC CGCCTTCACC GCCGCGATGG CTGCCACGAT CTGGATCCGG CGCTTCGGAC CGCGTGCCAC CAAAGCCGGG ACGGTCGTCG TCGTCCCGTT CATCACACTG CTGGTCACGC AAGGCCAGGG CGTGACCTCA CACGCAGCGA GCTACGACCT GTGGTGCGCG CTCATCGCAC TCGTCGCAGC ATTCTGGGTC GCGGTGTACC AAGTCGGCGC CGCAGCAATG GGATTCCACG AGCAGCGCCC CCGCCCACCG GCACCGCCTT CCCTCATCAC GCCATCCAGC GCCAAACGCG TCCCGGCGAG CACCCGCATG GCATGCCAGA TGGCTGTGGC ACTGGGCAGC GCCTTCGCCG TCGGCCACAT GGCTTTCCAC GACCACTGGC CGTGGGCCGT TCTCACCGCG TTCATCGTCT GCAGCGGCGC ACGCGGCCGG GGTGACGTGC TGCACAAGGG CGTGCTGCGC GCGGCGGGCG CCTCGGTCGG AACCGTCGTC GCGACCACCA TCGCCGGCGC CTTCCCACCC GGCGACCGCT GGTCGGTCGT CATCATCTTC GCGGTCCTTG GCGTGGCGAG CTGGCTGCGC GAGATCAGCT ACGTGTATTG GGCAGGGAGC GTGACCGCAG TCCTGTCATT GCTGTACGGC TACTTCGGAC AGAACGCGCC GTCACTGCTC GAAACGCGAC TCGAGGCCAT CCTGCTCGGC GCGGCGCTCG GCATCGCAGC ATCCTGGTAC GTACTGCCGG TCCGCACCGG GGACGTCCTG AAGCGACGCA CGGCCGAAGC CCTCGCAGCC CTCAGCGCCT TCCTCAGCTC GCCCCGCGGC GACCACACCG AGATCCGACG CCGCCAAGCC CACTTCCAGC ACGCAGTGAC TCAGCTGGAG CAGATCGCCA AACCACTGCG TGCACACCGA ATGCTCACCG GCGCCGCACT GCGAGCCGAC ACCATCGATG CGATGCACAC ATGCGTCGAG CCAGTCAGAA CGCTCGCCAG CATATTCGCG AGCATAGACG CCGAGACCGA CACCGAACCG GCATGGGAAC CACTGCGCCG CGCCGTAGCG GCAAACGTCG GCGCGATCCG CCGCGCACTC GGCAGCAAAC CAGGCGCGCC ATATCGAAGA ATCGAGGCGC AACCCAGCTC ACCGGCTAGC CTGGCGCTCA CCGCGCTGGA CGCCGCGCTC GCCGAACTAT CACGCTTCGA ACCTCGGGCG GCACCACTCT CCTCACGAGC GTGA
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Protein sequence | MAAVLSAFGS AVWIEHRAHL HLDIVIAAVA MTMILGRVQR GAHPGDRLIG TAVLVASAAS ASEVSSLLHR FPLFGDAAFT AAMAATIWIR RFGPRATKAG TVVVVPFITL LVTQGQGVTS HAASYDLWCA LIALVAAFWV AVYQVGAAAM GFHEQRPRPP APPSLITPSS AKRVPASTRM ACQMAVALGS AFAVGHMAFH DHWPWAVLTA FIVCSGARGR GDVLHKGVLR AAGASVGTVV ATTIAGAFPP GDRWSVVIIF AVLGVASWLR EISYVYWAGS VTAVLSLLYG YFGQNAPSLL ETRLEAILLG AALGIAASWY VLPVRTGDVL KRRTAEALAA LSAFLSSPRG DHTEIRRRQA HFQHAVTQLE QIAKPLRAHR MLTGAALRAD TIDAMHTCVE PVRTLASIFA SIDAETDTEP AWEPLRRAVA ANVGAIRRAL GSKPGAPYRR IEAQPSSPAS LALTALDAAL AELSRFEPRA APLSSRA
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