Gene Caci_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_4174 
Symbol 
ID8335528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4729463 
End bp4729795 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content69% 
IMG OID644957277 
Producthypothetical protein 
Protein accessionYP_003114879 
Protein GI256393315 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.257816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.271179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGC TTTCGCTCGA AGCGCTCTCC CGGCAGCACC TGGAGCGCGC CGCGTCGTCC 
TCGAACGGCC GCAGTTCTCA GACGGTGTAC GGCGGCCACG AACGCGTCCT GCGCCAGACC
CTCATCGCCC TGAGCGCCGG CAGCACGCTG GCCGAGCACG AGAACCCCGG TGAGTCGACG
ATCCTGGTGC TGCGCGGCCG GATCCGGCTG GTCTCCGACG ACGCCTCGTG GGAGGGCATG
ACCGGTGACC TGCTCATCGT GCCCGATGCC CGGCACAGCC TGGAGGCGGT GGAGGACGCG
ACTTTCGTGC TCACCGTGGC CAAGGCGCTG TAG
 
Protein sequence
MQKLSLEALS RQHLERAASS SNGRSSQTVY GGHERVLRQT LIALSAGSTL AEHENPGEST 
ILVLRGRIRL VSDDASWEGM TGDLLIVPDA RHSLEAVEDA TFVLTVAKAL