| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4154 |
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| Symbol | |
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| ID | 8335508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4694934 |
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| End bp | 4696484 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644957257 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003114859 |
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| Protein GI | 256393295 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.232645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.286804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG ACAGCACCAC CGAGACGACC AGCAGACCCG GGCCCGACCC GAAGTGGTGG
ACCCTGACCG CTGTCTGCCT CGGCACGGTC ATGCTCCTGC TGGACGTCAC GATCGTGAAC
GTCGCGCTGC CGCAGATCCA GAGCTCGCTG GGCGCCTCCT TCTCCGACGT GCAGTGGGTC
GTGGACGCCT ACGCGCTGAC CCTGGCCGCG CTGCTGCTGA CCACCGGCTC GCTGGCCGAC
CAGTACGGAC GGCGCCGGCT GTACCTGATC GGCCTGGTGC TGTTCACCGG CGCCTCGGTG
TTGTGCGGGG CGGCCCAGTC ACCGCTGATG CTGGAGTTGT CCCGTGGTGC GCAGGGGATC
GGCGGGGCGG CGATGTTCTC GGTGTCGCTG GCGCTGCTGG CCACGGCGTT CCGCGGCAAG
GACCGGGGCG TGGCGTTCGG GGTGTGGGGC GCGCTGACCG GCGTCGCGGT CGCCGCCGGG
CCGGTCGTCG GCGGCGTGCT GGTCTCCGGG CTGTCCTGGC GGTGGATCTT CTACGTGAAC
GTGCCGATCG GGATCGTGGC GCTGGTGCTG ACGGCGACGA GGGTCCGCGA ATCGCGGGAG
GAGCAGGCGC GCAAGCCGGA CTGGGCCGGC TTCGTGACGT TCTCGGCCGC GCTGGCGGCT
CTGGTCTACG CCCTCATCGA ATCCGGCCGC GCCGGCTTCT CCGACAGCAC GGTCGTGGCC
TGCTTCGTCG CCTCGGCGGT GCTGCTCGCG GTGTTCCTGG CCGTCGAACT GCGCAGTCCG
CATCCGATGT TCGACCTGGG CCTGTTCCGG CTGCCCACGT TCCTCGGCGG CGACATCGCG
GCGTTCGCGA TGTCGGCCGG GATGTTCGCG ATGCTGCTGT ATCTGGTGCT GTATCTGCAG
GACGTGCTCG GGTACAGCGC CCTGCAGACC GGCGTGCGGC TGCTGTTGCT GTCCGCCGGG
GTGCTCGTCG CCAGCGCCGT GTCCGGACGG TTGAGCGTCA AGGTCCCGGT CCGTTTCCTG
ATCGGACCGG GTCTGGCGCT CATCGGCCTC GGGCTGGTGC TGATGCGCGG GCTGGACGCG
ACATCGTCCT GGACCCACCT CATCCCCGGC CTCATCGTCG GCGGCATCGG GGTCGGGCTG
GTCAACCCGC CGCTGGCCTC CACTGCGGTC GGCGTCGTGG AACCCCGCCG CGCCGGCATG
GCCTCCGGGA TCAACGCCAC GTTCCGGCAG GTCGGGATCG CCACCGGCAT CGCGCTGCTC
GGCACGCTGT TCGCCAACCG CCTCACCTCG GCGGTCACCG CGCTGGCCGC CCCGACCCCG
CTGGCGTCCC ACAGCGCCGA GATCACCGAC GCCCTGCGCA ACGGGGACGC CGCCCGCCTG
TTCGCCACGA CGCCGCCGCA GCAGCGCGGA CAGCTCACGC AGATCGCTCG CGGCGCCTTC
ACCACCGGCT TGAACGAGAT CCTGCTGGTC GGCTCGATCA CCTGTTTCGT CGCCGCCGTA
CTGGCTATAG CGCTCATCCG GACCAAGGAC TTCAAGCGGG ACCACGAGTG A
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| Protein sequence | MSADSTTETT SRPGPDPKWW TLTAVCLGTV MLLLDVTIVN VALPQIQSSL GASFSDVQWV
VDAYALTLAA LLLTTGSLAD QYGRRRLYLI GLVLFTGASV LCGAAQSPLM LELSRGAQGI
GGAAMFSVSL ALLATAFRGK DRGVAFGVWG ALTGVAVAAG PVVGGVLVSG LSWRWIFYVN
VPIGIVALVL TATRVRESRE EQARKPDWAG FVTFSAALAA LVYALIESGR AGFSDSTVVA
CFVASAVLLA VFLAVELRSP HPMFDLGLFR LPTFLGGDIA AFAMSAGMFA MLLYLVLYLQ
DVLGYSALQT GVRLLLLSAG VLVASAVSGR LSVKVPVRFL IGPGLALIGL GLVLMRGLDA
TSSWTHLIPG LIVGGIGVGL VNPPLASTAV GVVEPRRAGM ASGINATFRQ VGIATGIALL
GTLFANRLTS AVTALAAPTP LASHSAEITD ALRNGDAARL FATTPPQQRG QLTQIARGAF
TTGLNEILLV GSITCFVAAV LAIALIRTKD FKRDHE
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