| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4153 |
|---|
| Symbol | |
|---|
| ID | 8335507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4693923 |
|---|
| End bp | 4694756 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957256 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_003114858 |
|---|
| Protein GI | 256393294 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0279461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.153113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGGTGGCTTT CGTACTGGGC GGCGGCGGAC CGCTGGGCGC CTACGAGGTC
GGCATGCTCA AGGCGCTCCT GGAGCGCGAG ATCCGGCCGG ACATGGTCCT CGGCTCCTCT
GTCGGCGCCT TGAACGGGGC GATGATCGCC GCCGATCCGC GACCGGACGC GGTGACGCGC
CTAGAGCATC TGTGGGTCTC CTTGCGCGAG CGTGGGGTGT TCGCGGACAA CTTGTTCGCC
CAAATGGGGA CCGCGCTGCG CAGCCGGACT CACCTGTTCT CCAACGCAGC GCTGCGCGGG
CTGATGGAAC GGGAGTTCGG CGACACGCAG ATCGAGGATC TGGAGGTTCC GTTCTCCTGC
GTCGCCGCCT CGATCGAACG CGCCGCAGAA CACTGGTTCA GCGACGGCCC GCTGATCGAG
GCGGTCCTGG CGTCCTCGGC CGTGCCGGGG CTGCTGCCGC CGGTGCCGGT CGGCGAGGAG
CACTTCCTGG ACGGCGGGCT GGTGGACAGC GTGCCGGTCG ATCGGGCGCT GGCCTCGGGC
GCCGGGACGG TCTACGTCCT GCACGTCGGG CGCCTGGACC AGCCGCTGCG TCCGCCGCGC
ACGCCGCGCG AGGTCGCCGT GGTCGCGTTC GAGATCGCCC GCCGGCACCG GCTCGTGCAC
GCCCTGAGCC ATCCGGTGGA CGGCGTCGAG GTGCACGTGC TGCCGACCGG CGCTCCGGGC
GGTCGCACCG ATCTGCGGCC GCGATACGGA CGGCGCGGGC TGGGACTGGT TCAGGAGCGC
ATCGAGCGGG CGTATCAGGC GTCTGCGGAC TATCTCGCGG AGCGTGCGTC ATGA
|
|---|
| Protein sequence | MSEPVAFVLG GGGPLGAYEV GMLKALLERE IRPDMVLGSS VGALNGAMIA ADPRPDAVTR
LEHLWVSLRE RGVFADNLFA QMGTALRSRT HLFSNAALRG LMEREFGDTQ IEDLEVPFSC
VAASIERAAE HWFSDGPLIE AVLASSAVPG LLPPVPVGEE HFLDGGLVDS VPVDRALASG
AGTVYVLHVG RLDQPLRPPR TPREVAVVAF EIARRHRLVH ALSHPVDGVE VHVLPTGAPG
GRTDLRPRYG RRGLGLVQER IERAYQASAD YLAERAS
|
|---|
| |