| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4130 |
|---|
| Symbol | |
|---|
| ID | 8335484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 4670471 |
|---|
| End bp | 4671349 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644957233 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003114835 |
|---|
| Protein GI | 256393271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.32419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGG TCATACTGGG AGACATGGAC GATCTTGCTG GCTTCCTTCG GACCCGGCGC
TCCCGGGTCG ATCCGGCCGT CGCGGGCATC CCCACCGACA GCCGCCGCCG GGTCGAAGGG
CTGCGCCGCG AAGAGGTCGC GCACCTGTCC GGAGTCAGCG TCGACTACTA CGTACGCCTG
GAGCAGGGCC GCGCCACGCA GCCCTCCGAC CAGGTCCTGG ACGCGCTGGC GGGAGTCCTC
GGGCTCGACG AGACCGAACG CGGACACCTC TACCGGCTCG CCCGCAAGCC CCGCCGCCGG
GCGAAGACGC CGAGCACGCG GATCCGTCCG GAGCTGCTGC GCGTCCTGGA CCTGGTCGCC
GACGCGCCGG CGCTGATCAT GGACCACCGG CTGGACGTGC TGGCCGGGAA CCGCCTCGCC
GGGCTTCTGT ACGGTCGGCC GATCCCGGGT CTGAACGTCG CGCGGCACAT CTTCCTGGAG
GAGGCCGAGC GCGGGTTCTA TGCGGAGTGG GAGACCTGCA CCCTCGACGT GGTCGGACAT
CTGCGCCTGG CCGTGGGCAG GTACCCCGAC GACCCGCGCC TGGCCTCGCT CGTCGGCGAG
CTGGCGATGG GCAGCGAGCG CTTCCGCCGG CTGTGGGCGC GCGCCGATGT GCGTGCCCGC
ACGCATGGAT GCAAGGTCTA CCATCACCCG CTGGTCGGGC TGTTGGAACT GCATCAGGAG
AACTTCGCGC TGCCCGGCGA ATCGAACATG GAGCTGTTGG TGATGACGGC CGCTCCTGGC
AGTCCCACCG AGGACGGGTT GCGACTGCTT GCCGGGCTGG GCGCGGACAG CGGCGCCGGG
CATCAAACAG TGCCGACGGA GAATGCTCAC CTCCGGTAG
|
|---|
| Protein sequence | MATVILGDMD DLAGFLRTRR SRVDPAVAGI PTDSRRRVEG LRREEVAHLS GVSVDYYVRL
EQGRATQPSD QVLDALAGVL GLDETERGHL YRLARKPRRR AKTPSTRIRP ELLRVLDLVA
DAPALIMDHR LDVLAGNRLA GLLYGRPIPG LNVARHIFLE EAERGFYAEW ETCTLDVVGH
LRLAVGRYPD DPRLASLVGE LAMGSERFRR LWARADVRAR THGCKVYHHP LVGLLELHQE
NFALPGESNM ELLVMTAAPG SPTEDGLRLL AGLGADSGAG HQTVPTENAH LR
|
|---|
| |