| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4101 |
|---|
| Symbol | |
|---|
| ID | 8335455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4633167 |
|---|
| End bp | 4634096 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644957204 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003114806 |
|---|
| Protein GI | 256393242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.518904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0241309 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACTG CGCTCGTCTC TCCTCGCGGT CTCGCCCTCG GCGCAACCGT CGTGCTCTGG
GCTTCGGCGT TCCCGGCGAT CAGGGTCGGC GTGCCGGGGT TGGGCGTTGC CGGGCTGTCG
CTGGAGCGGT TGGTGGTGGC GTCGGTGGCG CTGGCTGTGG TCGCGCCGTT TATGGGAGTG
CGGCGGCCGC GTCGGCGGGA CCTGCCACGC ATCGCGATGT GTGGGGCTGC CGGCATGAGC
GTGTACCAGC TGCTGCTCAA CTGGGGCGAG GTCCATGTCG CGGCGGGGAC TGCCAGCCTG
CTGATTTCCG TCGCGCCGGT CTTCAGCGTT CTGCTTGCCG CCGCGTTCCT GGGGGAGCGG
GTCACGGCGC GCGTCGTGAC CGGCAGCTTG ATCGCCTTGG GCGGCGCCGC GATCGTCGCC
GTCGGCGGCG GCTCGGCGCG GGTCTCCACG AGCGCGCTCG TGGTCATCGC CGCCGCCATC
GTGCAGGCTA CCTACCACTT CGGGTCCAAG CCGCTGCTGA GCCGCTACTC AGGGTTCGAA
GTCGCCTGCT ACGCGATGTG GAGCGGCACG CTGTTCCTGC TGCCGCTGCT CCCGGCAGCC
TGGCACGCCA CCTCCCACGC CACCGCCCCG GCGCTGGCCT CCGCGCTCTA CCTCGGCCTG
GCGCCGTCCG CGCTGGGCTT CGTGACCTGG GGCTACGCGG TCGCGCGGTA CCCGGTGGCG
CTGTCGACCG CCGCGCTGTA CCTCGTACCG CCGGTCACGC TCGCGGTCGC GTTCGTCTGG
CTCGGCGAGA CCCCGCAGCC GCTGGAGTTG CTCGGCGGGC TCGTCGGCAT CGGCGGCGTG
GTGCTGATTC AGCGCCGGGG GCGCGGAACG CTTGCCAGAC AACAGATCCA GCCCGCCTCT
GTACCTACCC CTGCTCGGAC GACCGGCTGA
|
|---|
| Protein sequence | MNTALVSPRG LALGATVVLW ASAFPAIRVG VPGLGVAGLS LERLVVASVA LAVVAPFMGV
RRPRRRDLPR IAMCGAAGMS VYQLLLNWGE VHVAAGTASL LISVAPVFSV LLAAAFLGER
VTARVVTGSL IALGGAAIVA VGGGSARVST SALVVIAAAI VQATYHFGSK PLLSRYSGFE
VACYAMWSGT LFLLPLLPAA WHATSHATAP ALASALYLGL APSALGFVTW GYAVARYPVA
LSTAALYLVP PVTLAVAFVW LGETPQPLEL LGGLVGIGGV VLIQRRGRGT LARQQIQPAS
VPTPARTTG
|
|---|
| |