| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4018 |
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| Symbol | |
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| ID | 8335371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4549893 |
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| End bp | 4551416 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644957124 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003114727 |
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| Protein GI | 256393163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.536093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00116869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCGATAC CATCACCGGC TTCGGCTCCG GCCCCGAGCA AGATGTCGGC GGCGCTGGCC
AAAGAACGGC TGGGTGCGCC CGCTGTGGGG TTCTTCATCC TCGCTGGGGT CGCGCCGTTG
ACCGTGACCG AGGGGGTGGT GCCCTCGGCG TTCGCCGCGA CCGGCCTGAC CAGTGTGCCG
GCCGCGTTCC TGGTGGTCGC GGCGGTGCTG GCTGTGTTCG TCATCGGATA CCTGGCGATG
GCGCGCAGGA TCCCGAACGC CGGGGCGGCC TACTCATTCA TCTCCCAAGG CCTGGGCAAG
CCTGCCGGGG TGGCCGGGGC GTTGGTGGCG GTGGTCGCCT ACAACCTGTT GCAGGTCGGG
CTGTACGGGA TGATCGGGCC GCAACTGGCC TCCTTCGCCG CCGACAACTT CGACGTTCAC
CTGCCGTGGG GCGTGTGGGC GTTCGGCGCG TGGGCGGTGG TGACTGTGTT GGGGCTGGCG
CGGGTGGACT TGAGCGGCCG GGTGTTGGGC GTGCTGTCGG TCCTGGAGCT GGTGGTCATC
GCCACGGTGA CGATACGGGG TCTGACACAC CCGGCGGCGG GCGGTGTCAG TTTCGCGGCG
CTGTCCCCGA GGAGCCTGCA TGCCTCTAGC TTGGGTGCGG TGCTGGCTGT GGCCGTGCTG
GGCTTCGTCG GGGTGGAGCA GGGACCGGTG TTCAGCGAGG AGGCACGCGA CCCACAGCGC
ACGATCCCGA CGGCCACCTA CATCTCCCTG GCCGTGATCG CCGCTGTTTA CGCTGCCGCG
TCCTGGGCTT TGGTCGTGCA CTACGGCGAC CAGGTGGTGC CGACAGCTCA GGGCCCAGAC
GGCACCGGGA TGCTGTTCGC GATGGCCCCG GGAACCGTGG CCAGCATCGG CCGCAGCTTG
TTCCTGACCA GCCTGCTCGC GGCGGCGTTG GCGTTCCACA GCGCGGTCGG CCGATACATG
TGGGCTTTGG GCCGGGAGCG GGTGCTGCCG GCGGTGATGG GCACCACCGG TTCCACCGGG
GCGCCCCGGG CGGCCTCCAT CGTGCAGAGC CTGCTGGGTG CGGCGGCGAT CTTGATGGCG
CTGGGCCTGC ACTGGGATCC GGTCGGGCAA CTGTTCTTCT GGGGCGGAAC GACCGGCGGT
GTCGGGATTC TGCTGCTGTT GACGGCGACC TCGGCCGCGG TCGTCCGCTA CTTCTGGACG
TTGCCCGCTG GCGAGCCGGT GTGGCGGCGC CTGGTAGCGC CGACAGCCGC GACGGTGCTA
CTGGCGGTGA TGGCGTGGTT GTGCATCGAA CACTTCGATG TGCTGCTCAA CGTCGCACCC
GGCTCGCTGC CCACCAAAAT CCTGCCCGGG CTGTTCGGCA TCGCCGCCGT CGTCGGCGCC
GGCTGGGCGC TGGTGCTCAA ACACCGCCAG CCCGACGCCT ACGCAGCCAT CGGCTTGGGC
AGCGCCGCAA TGGCCCACAG CATCACCACC ACCGCCGGGA CCTCGACGAC GCCGTCTGCG
AAGACTACGA GGAGCACGCA ATGA
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| Protein sequence | MSIPSPASAP APSKMSAALA KERLGAPAVG FFILAGVAPL TVTEGVVPSA FAATGLTSVP
AAFLVVAAVL AVFVIGYLAM ARRIPNAGAA YSFISQGLGK PAGVAGALVA VVAYNLLQVG
LYGMIGPQLA SFAADNFDVH LPWGVWAFGA WAVVTVLGLA RVDLSGRVLG VLSVLELVVI
ATVTIRGLTH PAAGGVSFAA LSPRSLHASS LGAVLAVAVL GFVGVEQGPV FSEEARDPQR
TIPTATYISL AVIAAVYAAA SWALVVHYGD QVVPTAQGPD GTGMLFAMAP GTVASIGRSL
FLTSLLAAAL AFHSAVGRYM WALGRERVLP AVMGTTGSTG APRAASIVQS LLGAAAILMA
LGLHWDPVGQ LFFWGGTTGG VGILLLLTAT SAAVVRYFWT LPAGEPVWRR LVAPTAATVL
LAVMAWLCIE HFDVLLNVAP GSLPTKILPG LFGIAAVVGA GWALVLKHRQ PDAYAAIGLG
SAAMAHSITT TAGTSTTPSA KTTRSTQ
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