Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3974 |
Symbol | |
ID | 8335327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 4510456 |
End bp | 4511268 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644957088 |
Product | hypothetical protein |
Protein accession | YP_003114691 |
Protein GI | 256393127 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.113102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.378108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGTC ATCAACGATC CTCACGCGCT GTCAGAGCCA GGAAACCGCT GGCAGCGGTC CTAGCCGGCA CAGCGTTGTC CATTCTCGGC TCCGCCGGCG CGGCTTCGGC ACACGTCACC ATCGGGCCCG ACGCGACCGC CAAGGGCGGC CGCGATGTGG AGCTGACCTT CCGGGTCCCC GACGAGGAGG CCACGGCGAC CACCACGAAG GTCGAAGTCG TCTTCCCCAC CGACCACCCC GTCACCGGCG TGCTGCCCGA ATCCACTCCC GGCTGGACGG TCGCGGTGAC GAACTCCACG CTGCCCAAAC CCGTCACCGC CGACGACGGC ACCGTCAGCC AGGCCGTCTC GAAGCTCACC TGGACCGGCG GGGCAACGGC GCCGGGGCAG TACCAGGGCT TCCGGGTGAT GCTGGGCAAG CTGCCCGACG ACACGAACCA GTTGGTCTTC AAGGCTGTTC AGACGTACTC CAACGGCGAC GTGGTGCGCT GGATCGATCT GGCGCAGCCC AGTCAGCCCG CGCCGGAGCA TCCGGCTCCG GTCCTGGTGC TGACCGCGCC CGGTTCCGGC TCGCAAACCT CGGACACCGC GGACACTGCG GCCAGCACAC CGTCGGTCAC CGCCGCCCCG GTAACACCGA ACTCAGCGAG CAGTGACACA ACCGCACGGA CGCTGGGGAC CGCAGGCATC GTGGTCGGCG TCGCCGGGCT GGCGGTGGGC GCGTTCGGCG TGTCGAGGGC GCGCCGCAAG AGCTCCGACT CCACTTCAGG CGCCACCTCC ACATCCGCCC CCACGTCCAC TCCTCCGGGT TGA
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Protein sequence | MSGHQRSSRA VRARKPLAAV LAGTALSILG SAGAASAHVT IGPDATAKGG RDVELTFRVP DEEATATTTK VEVVFPTDHP VTGVLPESTP GWTVAVTNST LPKPVTADDG TVSQAVSKLT WTGGATAPGQ YQGFRVMLGK LPDDTNQLVF KAVQTYSNGD VVRWIDLAQP SQPAPEHPAP VLVLTAPGSG SQTSDTADTA ASTPSVTAAP VTPNSASSDT TARTLGTAGI VVGVAGLAVG AFGVSRARRK SSDSTSGATS TSAPTSTPPG
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