Gene Caci_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3931 
Symbol 
ID8335284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4465959 
End bp4467296 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content68% 
IMG OID644957053 
Producthypothetical protein 
Protein accessionYP_003114656 
Protein GI256393092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00536629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.131737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAG GCGAACCGAC TGCCCTTCGC GTGCTTGTCG TTGAGCGTCG TTGGCGAACA 
TACGAGACGT TCCGCCGCCA CTTCGAGGAG GCCGCACGCG CGCTCGCGGC TGAGACGAAC
GATCCCCGCA TGGCGGCGCT CTCGGTGTCG CGGACGCAGT TCGAGCGGTG GCTCCGCGGC
GGGTTGACAA CACGTCCATA CCCGAACGCG TCGACCGTTC TGCAGCGGAT GTTCTCCGTG
GAGGTCGATG TGCTGCTGGG TCCGGCCAGC GAAGCCAATC TCCAGGAGCC AGCACAAGCG
TTCAACCTGA AAAGCGAGAT CACCATGGCT GCACACGAAT CATCCGAGCA CGCCGCCTAC
GCCGCCGCTC GAGCCGTCGA CGATACGACG ATCGAGCAGC TCCAAGAGGA TGTCGCCAAG
GTCGCCAGGG AGTATCCGGA AAAGGCACCG ATCGAGTCGT TCGCTGAGGC GAAACGGATC
CGTGACCTGG CACTGTCCCT GCTGGACCGC ACCGGCAGGC CCGCGCAGGA ATCCGAGCTG
TACGTCGCCG CCGGGCAGGC GTGCGGCATC CTGGCCACCG TCTCCTTCGA CCTCGGATAC
ACCGACGCCG CATCCGAACA GGCCAGGACA GTGTTCATCT ACGGCCGGAT GGTCGGGAAT
GAGGGACTGT GCGCGTGGGC AATGGGCATG CGGGCCCTGA TCGCGAACTG GTCGGAGTTC
CCGCTGGCGG CCTTGGAACT GGTCGCCAAG GGCCTGGCAA CAGCGCCAGC GGGCACGCCG
ACTGCTCGCC TGCACGCGAT CGGCGCGCGG GCCTACGCGC AGCTCGGCAA CGCCGCCTCC
GCAAGCGAGT CCGCGCGGCT CGCGCTATCT GCGGCCGACA GCGACTCACC GGCGTGCGAG
CTGCATGACG ACATCGGTGG GGAGTTCAGC TTCGATGGCG CTCGCCTGCG CCGCTGTCTG
GGCTCGGCGT ATGTCAGCCT GAAGCTGGCG GAGCCGGCCG CGCAGCACGC ACGGCAGGTT
ATCGAGCTCT ACGACACAGG CGCGCGGATC GTGCGCATGC CGAAGGTCGC CGTCGAGGCC
CGGATCGAGC TTGCCCACGC CTTGATCCTC AGCGGAGAAC TCGACAGCGC GACGGACACG
CTAGGCACCG TATTCGACCT CGCTCAGCCC CAGCGCGTCC ACGGCGTGAC AGAGCGGCTG
GTGAAGGCTC GACAGGCCCT GGCGCTGCCC GCCTATCAGG GCTCGTCCGA AGCGCTCGAC
CTCGGAGCAC GCATCGAGGC CTTTGCAGCC GGGTCGGCCG GAGCCATAGC CCCGGCGCTG
CCACCTCGCA GGTCCTAA
 
Protein sequence
MPEGEPTALR VLVVERRWRT YETFRRHFEE AARALAAETN DPRMAALSVS RTQFERWLRG 
GLTTRPYPNA STVLQRMFSV EVDVLLGPAS EANLQEPAQA FNLKSEITMA AHESSEHAAY
AAARAVDDTT IEQLQEDVAK VAREYPEKAP IESFAEAKRI RDLALSLLDR TGRPAQESEL
YVAAGQACGI LATVSFDLGY TDAASEQART VFIYGRMVGN EGLCAWAMGM RALIANWSEF
PLAALELVAK GLATAPAGTP TARLHAIGAR AYAQLGNAAS ASESARLALS AADSDSPACE
LHDDIGGEFS FDGARLRRCL GSAYVSLKLA EPAAQHARQV IELYDTGARI VRMPKVAVEA
RIELAHALIL SGELDSATDT LGTVFDLAQP QRVHGVTERL VKARQALALP AYQGSSEALD
LGARIEAFAA GSAGAIAPAL PPRRS