Gene Caci_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3913 
Symbol 
ID8335266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4443652 
End bp4444317 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content69% 
IMG OID644957037 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_003114640 
Protein GI256393076 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0164888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.240658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAATCA TCAAGGAAGA GATCGCCGTC CCCAGCCCGC GGGCGCGGGT CTGGGAGGTG 
GTGTCGAATC CCGAGGACGT CGTGTCCTGC ATCAGCGGCG CCGAACTCGG CGCGGCCCAC
GACGACGGCT CCTTCGACGG CGCCTTGACG ATCAAGTTCG GGGCGATCAG GGTCAAGTTC
GCCGCCCGGG TCCGGGTGGA GCTGGACGAG GCCGAACACA CCGGCCGCCT CTCGGCTCGC
GGAGGGGACG GGCAGGGCGC GACCCGTTTC CAAGCCGAAG CCGAGTTCCG AGTCGTCGAA
GGCGACGGGG CTGGCGAGAC AGGCGTAGGC AGCCGGAGCG CGCGCGTCGC CATGACCGGC
ACCGTGACCC TCACCGGCAA GCTCGCCTCG CTGGTCGAAG CCGGGGCCGG AGCCGTGGTC
TCCAGGATGA CCAAGGACTT CACGGCGAAG CTCGTCTGGA AGTGCACCGA GACCGAGCTG
GCACCCTCGC TTGCGTCCGC GCTGACGCTG GTCGAACCGG CGGAGGTCCG CGTTGGACTA
CCGAGCCGGA TTCGCGCGTG GTTCGCCCGG GTGGTGCTTC GGCGGCCGCC CGCACTCGCC
ATCGCAACCG TACAGAACAC CGTGCAGAAC GAGGAGATCG GCAGCGGCCA TGGCCCGACT
GAATAA
 
Protein sequence
MIIIKEEIAV PSPRARVWEV VSNPEDVVSC ISGAELGAAH DDGSFDGALT IKFGAIRVKF 
AARVRVELDE AEHTGRLSAR GGDGQGATRF QAEAEFRVVE GDGAGETGVG SRSARVAMTG
TVTLTGKLAS LVEAGAGAVV SRMTKDFTAK LVWKCTETEL APSLASALTL VEPAEVRVGL
PSRIRAWFAR VVLRRPPALA IATVQNTVQN EEIGSGHGPT E