| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3904 |
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| Symbol | |
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| ID | 8335257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4428420 |
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| End bp | 4429391 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644957030 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003114633 |
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| Protein GI | 256393069 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03638] CRISPR-associated endonuclease Cas1, ECOLI subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.242948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0868629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGAC CCGCCCAACG CGGCTCGTCA ACTCCCTACC AACTGCCCCG CATCGCCGAC
CGGGTCAGCT TCGTCTATCT GGAACGGTGT ACCGTCCATC GCGACGCCAA CGCCATCACC
GCCCAAGACG CCGACGGGAT CACCCACATC CCGTCGGCGA CCATCGGCAC CCTCCTGCTC
GGCCCCGGAA CCCGCATCAC CCACCAAGCC ATGGCAGTAC TCGGCGACTG CGGAGCAAAC
GTGGCATGGG TCGGCGAACA CGGCGCCCGC TTCTACGCAG CCGCACGCTC CCTCAACCGA
TCATCCGCAC TCGTGGAAGC ACAAGCAACC CTCTGGGCGA ACCGCCGCAC ACGCCTGGAC
ATCGCACGCG CCATGTACCG CATGCGATTC CCCGACGAGG ACCCCTCCGG CTTCATGCGC
CAACAACTAC TCGGCATGGA AGGCCGCCGA CTCAAAGACT GCTACCGACA ACAGTCACAA
CGCACCGGCG TGCCCTGGCA CGGCCGCCAA TACACACCGG GCAACTTCAA CGCCGGCGAC
GCCATCAACC AAGCAATCAC CGCCGCCGCA CAATGCATGT ACGGCGTCGC CCACACCATC
ATCACCGCGC TGGGTTGCTC TCCCGGACTC GGATTCATCC ACTCCGGGCA CGAACTGTCC
TTCGTCATGG ACATCGCAGA CCTGTACAAG ACCGAGATCG GAATCCCCGT CGCCTTCGAC
ACAGCCGCCG AAGACAGCAC CGACATCGGC CCACGAACCC GCCGCGCCCT ACGCGAGCAG
ATCCGCACCA CGCGACTGCT CGAACGGTGC GTCGACGACG TCAAAGCGCT ACTCACCACA
CCGAACAACG AACCCGGCAG CAGCGACGCC ACCGACACAG GCTTCTTCGA CCAGGTACAA
CTCCAGTCCG ACCGCGAAAC CGAAGTCGAA GGCGGAAGAA ACTACGCCGA CGAACTCGGC
ACAACCTGGT AA
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| Protein sequence | MAGPAQRGSS TPYQLPRIAD RVSFVYLERC TVHRDANAIT AQDADGITHI PSATIGTLLL
GPGTRITHQA MAVLGDCGAN VAWVGEHGAR FYAAARSLNR SSALVEAQAT LWANRRTRLD
IARAMYRMRF PDEDPSGFMR QQLLGMEGRR LKDCYRQQSQ RTGVPWHGRQ YTPGNFNAGD
AINQAITAAA QCMYGVAHTI ITALGCSPGL GFIHSGHELS FVMDIADLYK TEIGIPVAFD
TAAEDSTDIG PRTRRALREQ IRTTRLLERC VDDVKALLTT PNNEPGSSDA TDTGFFDQVQ
LQSDRETEVE GGRNYADELG TTW
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