Gene Caci_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3874 
Symbol 
ID8335227 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4386283 
End bp4387295 
Gene Length1013 bp 
Protein Length 
Translation table 
GC content66% 
IMG OID645946371 
Product 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00914635 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0352194 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCGCTAGGG AAAAACCTGA TCGCCGACAC GCCAAGATCC TCGTGTTGCG CCACGAGGTC 
GCCGTCCTAC GCCGGGCGAA TCCCAGGCCG CGCTTGGACT GGACCGACCG GGCGATCCTG
GCCGCTCTCA TCAGGCTCCT GCCCAAAGCG CTGCGCGGGC GCCGGATCGT CACACCGGGC
ACCGTGCTGC GCTGGCACAA GCGGCTGGTC GCCCGCAAAT GGACCCAGCC CTGTGCCGCA
GGCCGGCCCC CAATCAGTGG CGATCTCGTC GCCCTGATCG TGAAGATGGC GACCGAGAAC
AAGTCCTGGG GCTACCAGCG GATCCAAGGG GAGCTACGCC GCCTGGGACG CCGAGTCACC
GCCGCCACCA TCCGCAAGGT CCTGCGCGCG CACCGCCTGC CCCCGGCACC GCGCCGAGCT
GACGACCTGA CCTGGCGAAC GTTCCTACGA GCCCACGCCG ATTACTGGTC TGCGACTTCT
TTCACGGCGA CCTGGTGAAC CTGCAGCGGG TTTACGTGTT CTTCGTCCTC GACGTCCGCA
ACAGGTTCGT TCACATCCTT GGTGTCACCG CCAGCCCGAC CGCCGCCTGG ACCACGCAGC
TGGCCCGGAA CCTCATTGCT GATCTCGGTG ATCGGGGTGA ACCGCTGCGC TATCTCATCC
GTGACCGCGA CGCGAAGTTC ACCACCGCCT TCGACGCGAC CTTCGCCTCC GAAGGGATCG
AACCGGTTAA GACTCCTGCG CAGTGTCCTC GAGCGAACGC GTACGCCGAG CGCTTTGTGC
GTACCGTCAG GGCCGAATGC ACCGACCGCA TGCTCCTGGT CAGCAAACGC CACCTCCGCC
ACGTCCTCGA GGAATTCGCC GACCACTACA ACCGCGGACG CCCGCACCGC TCGCTCGACA
AGCGAGCACC CACCGACGAT CCCGATATCG TTCCGTTCCC GGTCCCACTG GGCCAGATAC
GCACCCGAAC GGTTCTCGGA GGCCTTATCA CCGAGTACGA ACGAGCTGCG TAG
 
Protein sequence