| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3767 |
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| Symbol | |
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| ID | 8335120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4255870 |
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| End bp | 4256928 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956907 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003114510 |
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| Protein GI | 256392946 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.33193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG TCAACGCCCC CGACGCCGTG CCCGTCGGCG AGGGCTCCGG GGCTCCGCCG
CCACAGCCGC GGCAGCCGCC CGACCCTGTC GGGCACGCCC GATCGGCCGA GGAAAGCGCG
CCCACGTCGG CGTTCACCGC GCAGCGTGTC ATCCCGTTGC GCCATCCGGG CCGCTGGATC
GCCACGGTCG CGGTGCTGGT GCTGGCCGCC CAGTTCGCGC ACGGCCTGAT CACCAACCCC
TTCTACCAAT GGGACCGCTT CGAGTACTGG TTCGCCAGGC CGGTCATCAT GCGCGGTCTG
GTCGTCACGT TGCGGGTGAC CGCGCTCAGC GCGGTCCTGG GCCTGGCCGG CGGTGTGCTG
CTGGCGTTGG CGCGGCAGTC GCGGAACCCG GTGCTGAACC TGGTCAGCTG GCTCTATATC
TGGGTGTTCC GGTCGGTGCC GCTGATCGTC GTGCTGCTGA TCCTGTTCAA CTTCAGCGCG
CTGTACAAGA CGCTCAGCCT CGGCGTGCCG TTCGGTCCGG GCTTCTTCCA CTTCGACGAG
AACAGGCTCG CCACCGAGCT CGTCGTGGCG ACGGTGGGCC TGAGCCTCAA CGAGGCCGCC
TACGCCGCCG AGGTCGTCCG CGCGGGCCTG CTGTCTGTGG ACCAGGGCCA GCACGAGGCC
GCGGCCTCAC TGGGACTGCC GCGCGGCTAC CAGTTCCGGC GGATCGTGCT GCCGCAGGCG
CTGCGCGCCA TCGTCCCCGC CTATGTCAAC CAGCTGATCG GGCTGATCAA GGGCACGTCG
CTGGTCTTCT ATGTCTCGCT CCTGGACCTG TTCGGGCAGG TGCAGACGAT GGGCAGCACC
TATCCCGCCG ACATCGTCCC GCTGCTGCTC GTGGCGACGG CCTGGTACGT CATCCTGACC
AGCGTCGTGT CGGCCGTCCA GTTCTACGTC GAGCGCCGGT ACTCACGAGG CGCGCTGCGC
ACGCTGCCAC CCACGCCGAT CCAGCGCTTG CGGGCCGGAG CGCGGAACGC TGTGCGGCAG
CTGCGGGACC GTCCCGAACT CGGTCCGGTG AAGGCATGA
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| Protein sequence | MTSVNAPDAV PVGEGSGAPP PQPRQPPDPV GHARSAEESA PTSAFTAQRV IPLRHPGRWI
ATVAVLVLAA QFAHGLITNP FYQWDRFEYW FARPVIMRGL VVTLRVTALS AVLGLAGGVL
LALARQSRNP VLNLVSWLYI WVFRSVPLIV VLLILFNFSA LYKTLSLGVP FGPGFFHFDE
NRLATELVVA TVGLSLNEAA YAAEVVRAGL LSVDQGQHEA AASLGLPRGY QFRRIVLPQA
LRAIVPAYVN QLIGLIKGTS LVFYVSLLDL FGQVQTMGST YPADIVPLLL VATAWYVILT
SVVSAVQFYV ERRYSRGALR TLPPTPIQRL RAGARNAVRQ LRDRPELGPV KA
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