Gene Caci_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3760 
Symbol 
ID8335113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4246112 
End bp4248100 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content73% 
IMG OID644956900 
ProductCarbamoyl-phosphate synthase L chain ATP- binding 
Protein accessionYP_003114503 
Protein GI256392939 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.156644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC GAGTCCTGAT AGCCAACCGC GGCGAGATCG CCCGGCGGAT CGCCCGGACC 
TGCCGCCGGC TGGGCATCGA GTACGTGGCC GTGTACTCCG AGGCGGACCG CTTCGCCGCG
CATCTGGACG GCGCGGTCGA GCACGTGGAG ATCGGCGGAG CCGCCGCGGC GGACAGCTAT
CTGAACATCG AGGCGGTCGT CGAGGCCGCG CTGCGTACCG ACTGCGACGC CGTCCACCCC
GGCTACGGCT TCCTGTCGGA GAACCCGCGC CTGGCGGCGG CCGTCGCCCA AGCCGGCCTG
GTCTTCGTCG GTCCCGGCGC CGAGACCATC GCCGCGATGG GAGACAAGGC GCGTGCCAGA
ACACTGATGG CGCAGGCCGG CGTCCCGGTG CTCCCGGGCT CCTCTCAGGC CACTGATTCC
CTGGCAGTGC TCGCTCAGGA CGCCGAGCGC ATCGGCTACC CGGTCATCCT CAAGCCCGTC
GCCGGCGGCG GAGGCAAGGG GATGGCGGTC GTCGCTGCCG CCGACGCCCT GCCGGGCGCG
GTCGAGCAGG CGGTGCGGAT CGGCCGCAGC GCTTTCGGCG ACGGACGGCT GCTCGTCGAG
CGCTATGTGG CCCGGCCGCG GCACATCGAG GTACAGGTGT TCGGCGACGG CCACGGGAAG
GTCGTCCACC TGCACGAGCG CGAGTGCTCG CTGCAGCGGC GCCATCAGAA GATCATCGAG
GAGGCGCCCG CCGTCGGGCT CGCCGCCGGG GTGCGCGAGG CGCTTCTGGC GGCCGCGGTC
CGCGGCGCCG AGGCGATCGG CTACGTCAAC GCCGGGACGT TCGAGTTCAT CCTCGACGGC
GAGGACTTCT TCTTCCTGGA GGTCAACACC CGCTTGCAGG TCGAGCATCC GGTGACCGAG
GAGGTCACCG GCGTCGATCT CGTGGAGTGG CAGCTGCGGG TCGCCGGCGG CGAGCCGCTG
CCGGTGGACC AGGAGCAGAT CACGGTCACC GGGCACGCCA TCGAGTGCCG CGTGTACGCC
GAGGACCCCG AGGCCGGGTT CCGGCCCGCG CCGGGATCGG CCGCCGCCGT CCGGTGGCCC
GGCGGCGTGC GGGTGGAAGC AGCCTTCGAC GACACCCCGG CCGGCGGGTT AAGCGGAGCG
CGCGGGGCCG CCGCCGTCCC GGCCTTCTAC GACCCCCTGA TCGCCAAGCT GGTCGCCCAC
GGGACCACCC GCGCCGCAGC ACTGCGGCAG CTCACCGGCG CGATCGCGCA GACCACAGTG
GCCGGGCTGA CGACCAACCT GGGCTTTTTG GCCGGGCTGC TGGCCGAGCC CGAAGTCCTC
GCCGGCCGGC TCGACACCCA CCTGGTGGAC GACCTCGTGG CCGGATCCGC GCACCGCGGC
TGCACCCGGC TGGCGGTGGC GTGCGCGGCC GCGATGGACG TCCCGGTGCC CGACTCGCCG
TGGACCGGCT CGATCGGCGC CTTCGGCCGC GCGGATCTGG ATCCGGACGC GCCGCTGGGC
CGGATCGTCG TGCACAGCGA CGATCGCGAA TGGCACGCGC GGTTGACCGG CGCGTCCGCT
GACGTGGCAC GGGTGACCGT GGACGGCCAG ACGTTGCGGG TCCGGACCCG CGCGCGCGGA
CACCTGTTCC ACGGCACCGT GGACGACATC CCCTGGACCG GGCTACGGAC CGCCGACGGC
TACGACATCA CCGTCGGCGG CTATCGCAAA ACCCTGACCG TCCCGTCCTT CGCCGAGGGC
GGTGCACGCG GTTCCGACGG CGCCGTGCGC ATCGACATGC CCGGCACGGT CGTCGCCGTC
GCCCGCGCGG CCGGCGATCC GGTCCACGCC GGGGACGTCC TGGTGGTCGT GGAGTCGATG
AAGTTGGAGA ACCGCGTCCT GGCCCCGTTC GCCGGCGTGC CGGACATCCG GTGCGCCGTC
GGCGACGTGG TGGCGGCCGG CCAGATCCTG GCGATCATGA AAACCCCTCC TGCGGAAGGT
GCGAAGTGA
 
Protein sequence
MLKRVLIANR GEIARRIART CRRLGIEYVA VYSEADRFAA HLDGAVEHVE IGGAAAADSY 
LNIEAVVEAA LRTDCDAVHP GYGFLSENPR LAAAVAQAGL VFVGPGAETI AAMGDKARAR
TLMAQAGVPV LPGSSQATDS LAVLAQDAER IGYPVILKPV AGGGGKGMAV VAAADALPGA
VEQAVRIGRS AFGDGRLLVE RYVARPRHIE VQVFGDGHGK VVHLHERECS LQRRHQKIIE
EAPAVGLAAG VREALLAAAV RGAEAIGYVN AGTFEFILDG EDFFFLEVNT RLQVEHPVTE
EVTGVDLVEW QLRVAGGEPL PVDQEQITVT GHAIECRVYA EDPEAGFRPA PGSAAAVRWP
GGVRVEAAFD DTPAGGLSGA RGAAAVPAFY DPLIAKLVAH GTTRAAALRQ LTGAIAQTTV
AGLTTNLGFL AGLLAEPEVL AGRLDTHLVD DLVAGSAHRG CTRLAVACAA AMDVPVPDSP
WTGSIGAFGR ADLDPDAPLG RIVVHSDDRE WHARLTGASA DVARVTVDGQ TLRVRTRARG
HLFHGTVDDI PWTGLRTADG YDITVGGYRK TLTVPSFAEG GARGSDGAVR IDMPGTVVAV
ARAAGDPVHA GDVLVVVESM KLENRVLAPF AGVPDIRCAV GDVVAAGQIL AIMKTPPAEG
AK