| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3733 |
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| Symbol | |
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| ID | 8335086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4207191 |
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| End bp | 4210214 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644956873 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114476 |
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| Protein GI | 256392912 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTCGT ACTGCCCTGT CCTGATCGGC CGTGCCGAGG AACTGCGGGT GCTCACGAGC
GCGCTGTCCG CGGTGCGGGA GGGCACCGGC GGCTCGGTGT TCCTGCTCGG CGAGCCGGGC
ATCGGCAAGT CGCGGCTCGC CGAGGAGTGC GTCGACGCGG CGCGCGCCGC CGGCCTGCGG
ATCCTGCGCG GTCACTGCGG GCCGCTGGGG GCGGCCACGC CGTTCCGGCC GCTGGTGGAG
GCGGTGTCCT CGCAGCTGCG CACCGGCCAC GTGCCGCGCA GCCCTGGCCT GCACCCGTAC
CGGGCCACGC TGGGCCGGCT GTTTCCAGAG CTGCGGGTGC CGGGCACTCC CGCGCCGGCC
GACCTGGTCG AAGTCTGCGA GGCGCTGCTG CGGTTGCTGG CCGCGTTCGG CGAGGAGAGC
GAGGGCTCAG AGACCGGCGA TGCGGGCGCC GGGACCAGCA AAGCCGACGG CGCGCTGCTG
GTCCTGGAGG ATCTGCACGA CGCCGACCGG GAGACCCTGG CCGTCGTGGA GTACCTGGTC
AACCACCTCC ACGGCGTCAG GGTCCTGCTG GTCGCCACCC TGCGCTCCGA GCCCGGGGCG
GCCGCCGACC TGGTGGGCCG GGTCACCCGC CGCCGAGCCG GGACCGTGCT CGAACTCGAT
CCGCTGGGGT CCGCCGAAGT CGCCGACATC GCGGCGCGCT GCCTGGCCGC GGCCGGGCCC
GGCGGCGTCC CCGCCGCGGT GGCCGAGTAC GTCGAACGCT ACGGCGCGGG CAACCCGTAC
CTGGTCGAGG AGCTACTGAG CGACTTGCTC GACGCCGGTC TGCTGCGGGC TACCTCGCAG
GGCTGGCGGA CGGCGGGCAA GCCCCAGGTC ACCGTGCCCC GGAGCATCGT CGAGGCACAC
GCGCGGCGGC TGGACCGGCT CGACTCCGGC TCCCGGGACC TGCTGCGGAC CGCGGCGCTG
CTGGGCCACC GGTTCAGCCT GCCGGCCCTG CAGACCGTTA CCGGCCTGGC CGATCCGGAC
CTGTTCGGGC GGGTGCACGT CGCGATCGAC GCCGGGTTCG TGCTGCCGGA CTCCGCGGCT
CCGGACTGGT ACTCCTTCCG GCACGCGCTG ACCGCCGAGG CGGTCCGGGC CACCCTGCTG
CCCGGCGAGC AGGCGGCACT GGCCCGGCGG GCGGTGGGCG CGCTGGAGGC GGCCGACCCG
GCGCTCCCCG ACGAGCGCTG CCACCTGGCC GCGGCCCTGA GCCGGATCGC CGGCAACCCG
CGCGCCGCCG CCCGGTACTA CGCCGAGGCC GGCCGCCGGG CCCTGGCCGA CGGCGCCACC
GAGACCGCCG TGGCGCTGCT GGAGCACGCC CACGACAACG TGCCGCCGGC CGAGCGCGCG
GCCGTGGACG CCGCGCTGAT CGAGGCCCTG ATCGAGGCCG ATCACCTCGA CAGGGCCCTG
ACACTCATGG ACACCGCGGA GTACTCGGCC GGGATCGCGA CCGGCCGCCG GATCGCGTTG
CACAGCCAGA TCGCGTGGAT CTCGGCGATG GCCGGGCGGC GGCCTGAGGC GGCGGCACAG
CTGGCGACGG CTCGCAGGCT GTGGGCCGGC AGCGGGGATG CCGACGGCGA GGGCGACGGC
AACGGCGACA GCGACGGCGA CAGTGGCAGT GAACTGACAC CGCCGCCGGA GCTGCTGCTC
GCTGAGGCGT ACTGCGTGTT CCTCCAAGGC GACGGCGACG CCGCCCAGCG CCGCACCGAG
GCGGAACGAT TCGCCCGGCT GGCCGCCGCC GAGGCCGAGC GCCGGTCCAG TCCGGTGATG
GTGTGCCTGG CCTCGCAGCT GTCGGCGCTG CTGGCGCGGG AGCAGGGGTT CGACGTCGCC
AACCGGATCC TGGAGCGGAT CCTGGCCGTG GCCGAGGCGA ACGACCTGCC GCTGTGGCGG
GCTGAGGCCA TGGTCTGCAT CGCCGGCAAC GATTTCATGA GCACCGGGTC CGGGCATCTG
CTGGAGCAGG CTCGCGACAT CTCGTTCCAG ACCGGCAGCG TCTCTCGCGG CTTGGTGATG
GAGAACGGCT TGGCGCTGCA CGCCGTCCTC GCCGCCGACC ACGAACGGGC CGGAGAGATC
CTGGCGCGGT GCCGGGCCGG CACCATTCAG GTCCGGGGGT TGGGGGACGA GCGGTACCCG
GTCCTGGTGG CGGCCATGTC AGCGGCTCAC CGCGGCCTGC GCGCCGCCAT GGATCGGGAA
CTGGCGGTGT TCGCAGAGCA CGACGACCCC TCGCCGCTGG TGCCGCTGAA ACTGGGGCTG
TGCCGGGCGT TCTGCGCGCT GCTGGAGGAG GACCGCAGTC TGGCGCTGGC CGAATTGGAC
GCCTTGGACA CCTGGCTGGA CGCCAATCCG AGCCCGTTCT ATCTGGCCGG CCGGCATGGA
TTACGGCCGC TGCTGATGAC GCTGGAAGGA CGCTGGACCC GAGACCGTTA CGAGCAAGCC
GCCTCCGGGC CGGGCGCGCG GCTGCGCTGG AACGCGCAGT TCCTGCATCT GGCTGACGCG
GTGTTGCTGG GTCGGGAGGG GCGCGCCGAG GCTGCCGCTG CGGCGGTCGA TACCGCCGTG
GCCGCCGCGG CTCCGTTTCC GATGGCCAGG GCTCTTGGTC TGCGGCTGGT CGGTGAGGCT
GCGGTGGCTG ACGGGTGGGG CGAACCCGAT CGGTGGTTGC GCACCGCCGA GGAGTACTTC
CACGCACGGG ACGTGCATCC GGTTGCCGGC CGGTGTCGGG CTCTGCTTCG GCAAGCGGGA
GTGCGGGTGG CGCAGCGGCG CGACAGCTCG GAGCAGATTC CGGCGGTTCT GCGGGAGCGC
GGCGTGACAG TACGCGAATA TCAGGTCTTT GCTTTGCTGC CCGGGCGCCC GACGAACAAG
GACATCGCGC GGTGGCTGGT CATCTCCCCG CGGACCGTCG AGAAGCATGT CGCCAGCCTG
ATCATCAAGG CTGGGCAGGC GGATCGGACC AATCTGTGCG CTTACGCGGC GGAGCTGGCA
CGAGGTGGCG CTCGCCAGGG CTGA
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| Protein sequence | MRSYCPVLIG RAEELRVLTS ALSAVREGTG GSVFLLGEPG IGKSRLAEEC VDAARAAGLR
ILRGHCGPLG AATPFRPLVE AVSSQLRTGH VPRSPGLHPY RATLGRLFPE LRVPGTPAPA
DLVEVCEALL RLLAAFGEES EGSETGDAGA GTSKADGALL VLEDLHDADR ETLAVVEYLV
NHLHGVRVLL VATLRSEPGA AADLVGRVTR RRAGTVLELD PLGSAEVADI AARCLAAAGP
GGVPAAVAEY VERYGAGNPY LVEELLSDLL DAGLLRATSQ GWRTAGKPQV TVPRSIVEAH
ARRLDRLDSG SRDLLRTAAL LGHRFSLPAL QTVTGLADPD LFGRVHVAID AGFVLPDSAA
PDWYSFRHAL TAEAVRATLL PGEQAALARR AVGALEAADP ALPDERCHLA AALSRIAGNP
RAAARYYAEA GRRALADGAT ETAVALLEHA HDNVPPAERA AVDAALIEAL IEADHLDRAL
TLMDTAEYSA GIATGRRIAL HSQIAWISAM AGRRPEAAAQ LATARRLWAG SGDADGEGDG
NGDSDGDSGS ELTPPPELLL AEAYCVFLQG DGDAAQRRTE AERFARLAAA EAERRSSPVM
VCLASQLSAL LAREQGFDVA NRILERILAV AEANDLPLWR AEAMVCIAGN DFMSTGSGHL
LEQARDISFQ TGSVSRGLVM ENGLALHAVL AADHERAGEI LARCRAGTIQ VRGLGDERYP
VLVAAMSAAH RGLRAAMDRE LAVFAEHDDP SPLVPLKLGL CRAFCALLEE DRSLALAELD
ALDTWLDANP SPFYLAGRHG LRPLLMTLEG RWTRDRYEQA ASGPGARLRW NAQFLHLADA
VLLGREGRAE AAAAAVDTAV AAAAPFPMAR ALGLRLVGEA AVADGWGEPD RWLRTAEEYF
HARDVHPVAG RCRALLRQAG VRVAQRRDSS EQIPAVLRER GVTVREYQVF ALLPGRPTNK
DIARWLVISP RTVEKHVASL IIKAGQADRT NLCAYAAELA RGGARQG
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