| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3700 |
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| Symbol | |
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| ID | 8335053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 4150148 |
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| End bp | 4151830 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956840 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003114443 |
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| Protein GI | 256392879 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.715458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCACG TCGACAACAA CCTTCTGCCC GCCGCCGCCG ATCAGGACCG CGCACCGGCC
GCCGCCTGGT GGCGCAGCGC GTCGATCTAC CAGGTCTACA CGCGCAGCTT CGCCGACTCC
GACGGGGACG GCGTCGGCGA CCTGCCGGGG GTGCGCGCCA AGCTGCCGTA TCTGGCGGAT
CTGGGCGTCC AGGCACTGTG GTTCAACCCC TGGTATCCCT CGCCGATGGC TGACGCGGGC
TACGACATCG CCGACTACCG CGACATCGAG CCGGTGTTCG GGACGCTGGC CGACGCCGAC
GCGCTGATCG CCGAGGCGCA CGGGTACGGC ATCAAGGTGA TCATCGATGT GGTCCCCAAC
CACTGCTCGG ATCAGCACCC TTGGTTCCAG GCGGCGCTGG CGGCCGGGCC CGGCTCGGTC
GAGCGTGAGC GGTTCTGGTT CCGTCCGGGG CGCGGTGCGG ACGGCTCGCT GCCGCCGAAC
GACTGGCAGT CGATTTTCGG CGGCCCGGCC TGGACGCGCG TCCCGGCGGC CGAGGGCACT
CCCGGTGAGT GGTACCTGCA CCTGTTCGCC CCCGAGCAGC CCGACTTCAA CTGGACGTCG
GCGGACGTCC GGGCGGAGTT CGAGGACGTG CTCCGGTTCT GGTTCGACCG GGGCGCGGAC
GGGATCCGGA TCGACTCCGC CGCACTGCTG ACCAAGGACG CCGAGCTCCC CGACCTGGCC
TCCGCTCCCG AACAGCACCC CTTCGAGGAC CGCGACGACG TCCACGAGAT CTACCGCGCC
TGGCGCGCCG TGGCCGAATC CTACGGCGGC GACCGCGCCC TGATCGGCGA GCTGTGGATC
CCGGACCCGG AGCGCTTCAC CCACTACTTC CGCCCCGACG AGCTGCACAG CGCCTTCAAC
TTCCCCTACC TGTGCAGCGC CTGGAACGCC ACCGAGCTCC GCTCCGTCAT CGACGCGACC
ATCCAGATCC ACGCCCCGGT CGACGCCCCA CCGACGTGGG TCCTGTCGAA CCACGACGTG
GACCGCCACG TCTCCCGCTA CGGCCGCACC GACACCTCCT TCGCCATGGA CCGCCGCGAA
CACGGCCGCG CCCTCGACAT CGAGCTCGGC ACCCGCCGCG CACGAGCAGC GGCCTTGCTG
ACCTTCGCAC TCCCCGGCGC GGTGTACATC TACCAGGGCG ACGAGCTGGG CCTGTGGGAG
GTCGAGGACA TCCCCGCGCA CCTCCGCCAG GACCCGATCT GGCACCGCAC CGGCGGGTCG
GACCCTGGCC GCGACGGCTG TCGCGTGCCT CTTCCGTGGT CCGGAACTCG GGCGCCCTTC
GGCTTCTCTC CGGCTGACGC GGCGAACGCG GTCGAACCAT GGCTGCCGCA GCCGGCAGAC
TGGGCCGCCC TCACGGTCGA AACCCAAACC GGCGACCCCC GCTCCATGCT CGAGCTCTAC
CGCGCAGCCC TCCGCATCCG CCGCGAGGAA CCGGCGCTGG GAGACGGCAC GCTGCACTGG
ATGCCGAGCG ACGAGGCGGT CCTGGACTTC ACCAGAGGCG GATCGCTGCG CTGCATCGCG
AACCTGTCCA CGACGCCGAT TCCCCTGCCG CCGCACGCCG GGATCTTGGT GCAGAGCGCG
GACTTGGTCG AGGGGATGCT GGCTGCGGAT GCTGCGGTGT GGTTGCGGGT GGCGGTGGGG
TGA
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| Protein sequence | MIHVDNNLLP AAADQDRAPA AAWWRSASIY QVYTRSFADS DGDGVGDLPG VRAKLPYLAD
LGVQALWFNP WYPSPMADAG YDIADYRDIE PVFGTLADAD ALIAEAHGYG IKVIIDVVPN
HCSDQHPWFQ AALAAGPGSV ERERFWFRPG RGADGSLPPN DWQSIFGGPA WTRVPAAEGT
PGEWYLHLFA PEQPDFNWTS ADVRAEFEDV LRFWFDRGAD GIRIDSAALL TKDAELPDLA
SAPEQHPFED RDDVHEIYRA WRAVAESYGG DRALIGELWI PDPERFTHYF RPDELHSAFN
FPYLCSAWNA TELRSVIDAT IQIHAPVDAP PTWVLSNHDV DRHVSRYGRT DTSFAMDRRE
HGRALDIELG TRRARAAALL TFALPGAVYI YQGDELGLWE VEDIPAHLRQ DPIWHRTGGS
DPGRDGCRVP LPWSGTRAPF GFSPADAANA VEPWLPQPAD WAALTVETQT GDPRSMLELY
RAALRIRREE PALGDGTLHW MPSDEAVLDF TRGGSLRCIA NLSTTPIPLP PHAGILVQSA
DLVEGMLAAD AAVWLRVAVG
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