| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3647 |
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| Symbol | |
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| ID | 8335000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4080067 |
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| End bp | 4081527 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956787 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003114390 |
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| Protein GI | 256392826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.04243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA CGGCGATCAC GCTGCCTCAG CGCAAGGGCG TCGTGGGCTG GACGCTGGCG
CTGGCCGCGC TCGGCACCTT CCTGCCGACG CTCGACATCG TCGTGGTGTC CACGGCCCTT
CCGACGCTGC GCACGCACCT GCACGCGAGC CTGTCGGACC TGGAATGGAC CATCAACTCC
TACAACCTGG TCTTCGCCGT CTTCATGCTC ACCGGCGCGG CGCTGGGCGA CCGGTTCGGC
CGCAAGCGGC TCTACGTCAC CGGCGTGACC ATCTTCACCG CGGCCTCGCT GGCGAACGCG
CTGGCGACCA CGAGCGGGGA GCTGATCACC TTCCGGGCCA TCCAGGGCAT CGGAGCCGCC
ATCATCTTGC CGCTGACCGT GACGCTGGTG GCGGACGTGA TGCCGGTGGA GAAGCGCGCC
ATGGCGATCG GGTTGCTGGG CGGGGTGACA GGGCTCGGCG TGGCCGCCGG ACCGGTGGTC
GGCGGAGCCA TCGTGGAGGG CATCTCCTGG CAGTGGATCT TCTGGCTCAA CGTCCCGGTC
GGCATCGTGA TCGCGATCGG CTCGGCGGTG TTCCTGCGGG AGAGCAAGGG CTCGCGCACC
TACCTGGACA TCCCCGGTCT GGTGCTGGCC GGCGCGGCGA TGTTCGGCCT GGTCTGGGCC
GCGGTGCGGG GTCCCTCGAT CGGCTGGCGC ACCGGCGAGG TGGCCGTGAG CCTGATCGGC
GGCCTGGTGC TGATCGCCGC CTTCATCCTG TGGGAGCAGC GGACGAGCAC GCCGATGCTG
CCGGTGTCCT ACTTCCGGAA CCGGGGCTTC AACGGCGCCA ACTGGGCCAG CTACTTCATG
CAGATCTCGA TCATCGGCTC GCTGTTCATG ATCACCCAGC TGTTCCAGAT CGGCATGGGC
TACTCGCCGA TGACCACCGG CGTCCGGATC CTGGTCTGGA TGGCGATGCC GATGCTGGTC
GCGCCGCCCG GCGGCATCCT GGCCGGCAAG CTGGGCAACC GGCCGGTGCT GCTGGTCGGC
CTGACCCTGC AGGCCGCCGG TCTGGCCTGG CTGGCCGAGG CGGTGCACGT CGGGGTCGGC
TACGGCTCCA TGGTCGGCCC GCTGATCGTG GCCGGCATCG GGATCTCGCT GTGCTTCCCG
GTGGTCTCCA ACGCGATCGT GGACTCCGTA CCGTTCGAGG AGATCGGCGT GGCGAACGGC
GCGAACAAGA CCTTCGTGGA GCTCGGCAGC GTCTCCGGTG TGGCGATCCT GTCCGCGGTG
TTCGCGAGCC AGGGCGGCTA CGGCTCCTCG GCGGCGTTCA TCGACGGCTT CAAGCCGGCG
ATGTACACCT CCGCCGCGCT GGCCGCGGTC GGCCTGATCG GCGCGCTGAT GCTGCCTCGC
GGCAGCGCCG CCCAAGCTCT GCAGCAGCAG GCGCAGCTGA AGCAGGTGGC GCAGGCCGAG
CCCGCCGCCG AGGGGGTGTG A
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| Protein sequence | MSGTAITLPQ RKGVVGWTLA LAALGTFLPT LDIVVVSTAL PTLRTHLHAS LSDLEWTINS
YNLVFAVFML TGAALGDRFG RKRLYVTGVT IFTAASLANA LATTSGELIT FRAIQGIGAA
IILPLTVTLV ADVMPVEKRA MAIGLLGGVT GLGVAAGPVV GGAIVEGISW QWIFWLNVPV
GIVIAIGSAV FLRESKGSRT YLDIPGLVLA GAAMFGLVWA AVRGPSIGWR TGEVAVSLIG
GLVLIAAFIL WEQRTSTPML PVSYFRNRGF NGANWASYFM QISIIGSLFM ITQLFQIGMG
YSPMTTGVRI LVWMAMPMLV APPGGILAGK LGNRPVLLVG LTLQAAGLAW LAEAVHVGVG
YGSMVGPLIV AGIGISLCFP VVSNAIVDSV PFEEIGVANG ANKTFVELGS VSGVAILSAV
FASQGGYGSS AAFIDGFKPA MYTSAALAAV GLIGALMLPR GSAAQALQQQ AQLKQVAQAE
PAAEGV
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