Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3639 |
Symbol | |
ID | 8334992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4072672 |
End bp | 4073172 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956780 |
Product | conserved hypothetical membrane spanning protein |
Protein accession | YP_003114383 |
Protein GI | 256392819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00176817 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0197623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCG CCGGGGTGAC GGCCGGCGTC GTCGGCGGTG TTCCGATGGC GGCCTGGTCG ATGTTCATGA TGCATCTGTC CGGTCGGGGG TGGTGGACGC CGCTGAATCT GATCGCGCAC ACGTTCTGGC GCTCGGCGCC GTTGGACGGG ACGTTCAGCC TTCTGGCCTC GGTGCTCGGC ACCGCGGTGC ACGTCGTGGT GGCGGCGGTC TTCGGCATCG CGATCGCGGT GGTGGCCGGA CGCCGTCCGA ACTCGCGGTC CATGGTGATC GCCACCGGCC TGCTGTTCGC CTCGCTGGTG TGGTCGGTGA TGCAGTTCGG CGTCTGGCGC ACGCTGGACC GCCAAGCCGC CGCGGACTTC ACGCCGTGGG TCATGGCCAG CGGACACTTC GTCTTCGGGA TCGGCGCCGC CGCGATCGCC AGCATCCTCG TGACTGATGA CGGCGCAGGG TCCGGAGGAC GTCAGGACAT TGAGAGTCGG GTCAGAGCTC GATCCGCGTG A
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Protein sequence | MIRAGVTAGV VGGVPMAAWS MFMMHLSGRG WWTPLNLIAH TFWRSAPLDG TFSLLASVLG TAVHVVVAAV FGIAIAVVAG RRPNSRSMVI ATGLLFASLV WSVMQFGVWR TLDRQAAADF TPWVMASGHF VFGIGAAAIA SILVTDDGAG SGGRQDIESR VRARSA
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