Gene Caci_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3639 
Symbol 
ID8334992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4072672 
End bp4073172 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID644956780 
Productconserved hypothetical membrane spanning protein 
Protein accessionYP_003114383 
Protein GI256392819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00176817 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0197623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCG CCGGGGTGAC GGCCGGCGTC GTCGGCGGTG TTCCGATGGC GGCCTGGTCG 
ATGTTCATGA TGCATCTGTC CGGTCGGGGG TGGTGGACGC CGCTGAATCT GATCGCGCAC
ACGTTCTGGC GCTCGGCGCC GTTGGACGGG ACGTTCAGCC TTCTGGCCTC GGTGCTCGGC
ACCGCGGTGC ACGTCGTGGT GGCGGCGGTC TTCGGCATCG CGATCGCGGT GGTGGCCGGA
CGCCGTCCGA ACTCGCGGTC CATGGTGATC GCCACCGGCC TGCTGTTCGC CTCGCTGGTG
TGGTCGGTGA TGCAGTTCGG CGTCTGGCGC ACGCTGGACC GCCAAGCCGC CGCGGACTTC
ACGCCGTGGG TCATGGCCAG CGGACACTTC GTCTTCGGGA TCGGCGCCGC CGCGATCGCC
AGCATCCTCG TGACTGATGA CGGCGCAGGG TCCGGAGGAC GTCAGGACAT TGAGAGTCGG
GTCAGAGCTC GATCCGCGTG A
 
Protein sequence
MIRAGVTAGV VGGVPMAAWS MFMMHLSGRG WWTPLNLIAH TFWRSAPLDG TFSLLASVLG 
TAVHVVVAAV FGIAIAVVAG RRPNSRSMVI ATGLLFASLV WSVMQFGVWR TLDRQAAADF
TPWVMASGHF VFGIGAAAIA SILVTDDGAG SGGRQDIESR VRARSA