Gene Caci_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3615 
Symbol 
ID8334968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4043098 
End bp4043574 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content74% 
IMG OID644956756 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003114359 
Protein GI256392795 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.210335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CCGCCCCCAA GCCCCTCGCC CTGCGCCGGC GCCTGCCGTT CGCGCTGGTC 
ACCCTGGCCA CGGCCGCGCG GCGCGACACC ACCCAGGCCT TGGCCGGCAG CAACCTGGGC
GTCTTCCAGC ACGCGGTCCT GGCCGTCCTG GCGGAGTGCG GGCCGCTGAT CCAGAAGGAC
GCCGCCGCGC GCCTGGGCAT CGACAGCGGC GACATGGTCG CCTACGTCGA CGACCTGCTG
GCCGCGGGCA GCGTCGACAA GCAGCGCGAC CCGGCCGACC GGCGCCGGCA GATCCTGGAG
ATCACCCCCG CGGGCAAGCG CCTCCTGGCT GACGCCGAAC GCGACCTCGA CGCGGCGACC
GAGCAGACCT TCGGCGCTTT GAGCACGCAA GAGCGCGGCC AGCTGTACGA ACTTCTGGTG
CGCGTCCTCG CGCAGCGCGA CCCGGACGGC TGGCCCGACG CGGAATCAGC GAGTTAG
 
Protein sequence
MTTPAPKPLA LRRRLPFALV TLATAARRDT TQALAGSNLG VFQHAVLAVL AECGPLIQKD 
AAARLGIDSG DMVAYVDDLL AAGSVDKQRD PADRRRQILE ITPAGKRLLA DAERDLDAAT
EQTFGALSTQ ERGQLYELLV RVLAQRDPDG WPDAESAS