Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3562 |
Symbol | |
ID | 8334915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3975516 |
End bp | 3976805 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956705 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003114308 |
Protein GI | 256392744 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCACC ACACTCCCGC GATGGCCGTC GCACTGGCGC TGGCCGGCGC CGCCGTGGTC ATGATCGTGG CCGCGGTGCT GTCGGTCGCC GGCCGGCGGC TGCGCCAGCC CGCGGTGATC GCCGAGATCG CCGCCGGCAT CTGCCTGGGC CCGAGCCTGC TCGGCCTGTT CGGCGGCGAC CTGCCGGCCC GGCTGTTCCC GACCGACGTG CGTCCCCTGC TGTCCTCGAT GGCCGAGGTC GGGATCGTCG TGTTCATGTT CCTGGTGGGC TGGGAGCTGG ACGTGAGCGT GATCCGCGGC CGCCGGGGGC TGATCGGCAC GGTGGCCCTC TCGGCGATGG CGCTGCCCTT CGCCTGCGGG GTGGGCTTGG CGGCCTGGCT CTACGCCGGG CACATGACGG TCGGCGGCCA CCACGTCGAC CGCACCGCCT TCATCCTGTT CGTCGGCGTC GCGATGTCCA TCACCGCCTT CCCGGTCCTG GCGCGCATCA TCGTCGAGCA CCGGCTCGGC GGTACCGAGG TCGGCGTCAT CGCGCTGGCC AGCGCCGCCG CCGGCGACAT GCTGGCGTGG GGGATGCTCG CCGTGGTCAC CGCGGTCGCC GCCGCGCAGG GCCAGTCCGG CGTGACCCGC GTGCTGGTCT ACTCGGCGAT CTACCTGGCC GCCATGTTCC TGATCGTCAA GCCGCTCCTG CGCCGCCTGG TCGCCTGGCT GGCCGCGGAC GCGCGCGAGG CGACGATGCC GATGACCGTG CTCGGCGCCG GGGTGTTCCT GTCCGCCTAC GCGACCCAGT GGGTCGGGCT GGACGCGATC TTCGGCGCGT TCGTCTTCGG CGCCGTGATG CCGCGCGGCG CGACCGGCAC CCTGCGCACC CGCGTCCAGG AGCCGATGGA GCACGTCAAG GTCCTGCTCA TGCCGATCTT CTTCATCATC ACCGGCCTGT CGATCGACGT CACCCAGCTC GGCGGCAGCG GCGTGGCCGA GCTCGGCGCG ATCGTCGTCG TGGCCTGCGT CTGCAAGTTC CTCGGCGCGG GGCTGCCGGC CCGTGCCTTC GGCATGTCCT GGCGCGATTC GAGCACCCTG GGCCTGCTGA TGAACACCCG CGGCCTGACC GAGCTGATCA TCCTCAACGT CGGCCTGAAC CTGGGAGTCC TGGACACCCG CATGTTCACC ATGATGGTGC TGATGGCCCT GGTCACCACC GGAATGGCCG GACCGCTGGT CCCCAGGTTG CCCGATCTTC GAGCAGAGGA CGCCGTCAAG CCCATGGCCG CCTCCGTCCG CGGCGTCTAG
|
Protein sequence | MPHHTPAMAV ALALAGAAVV MIVAAVLSVA GRRLRQPAVI AEIAAGICLG PSLLGLFGGD LPARLFPTDV RPLLSSMAEV GIVVFMFLVG WELDVSVIRG RRGLIGTVAL SAMALPFACG VGLAAWLYAG HMTVGGHHVD RTAFILFVGV AMSITAFPVL ARIIVEHRLG GTEVGVIALA SAAAGDMLAW GMLAVVTAVA AAQGQSGVTR VLVYSAIYLA AMFLIVKPLL RRLVAWLAAD AREATMPMTV LGAGVFLSAY ATQWVGLDAI FGAFVFGAVM PRGATGTLRT RVQEPMEHVK VLLMPIFFII TGLSIDVTQL GGSGVAELGA IVVVACVCKF LGAGLPARAF GMSWRDSSTL GLLMNTRGLT ELIILNVGLN LGVLDTRMFT MMVLMALVTT GMAGPLVPRL PDLRAEDAVK PMAASVRGV
|
| |