Gene Caci_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3562 
Symbol 
ID8334915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3975516 
End bp3976805 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content72% 
IMG OID644956705 
Productsodium/hydrogen exchanger 
Protein accessionYP_003114308 
Protein GI256392744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC ACACTCCCGC GATGGCCGTC GCACTGGCGC TGGCCGGCGC CGCCGTGGTC 
ATGATCGTGG CCGCGGTGCT GTCGGTCGCC GGCCGGCGGC TGCGCCAGCC CGCGGTGATC
GCCGAGATCG CCGCCGGCAT CTGCCTGGGC CCGAGCCTGC TCGGCCTGTT CGGCGGCGAC
CTGCCGGCCC GGCTGTTCCC GACCGACGTG CGTCCCCTGC TGTCCTCGAT GGCCGAGGTC
GGGATCGTCG TGTTCATGTT CCTGGTGGGC TGGGAGCTGG ACGTGAGCGT GATCCGCGGC
CGCCGGGGGC TGATCGGCAC GGTGGCCCTC TCGGCGATGG CGCTGCCCTT CGCCTGCGGG
GTGGGCTTGG CGGCCTGGCT CTACGCCGGG CACATGACGG TCGGCGGCCA CCACGTCGAC
CGCACCGCCT TCATCCTGTT CGTCGGCGTC GCGATGTCCA TCACCGCCTT CCCGGTCCTG
GCGCGCATCA TCGTCGAGCA CCGGCTCGGC GGTACCGAGG TCGGCGTCAT CGCGCTGGCC
AGCGCCGCCG CCGGCGACAT GCTGGCGTGG GGGATGCTCG CCGTGGTCAC CGCGGTCGCC
GCCGCGCAGG GCCAGTCCGG CGTGACCCGC GTGCTGGTCT ACTCGGCGAT CTACCTGGCC
GCCATGTTCC TGATCGTCAA GCCGCTCCTG CGCCGCCTGG TCGCCTGGCT GGCCGCGGAC
GCGCGCGAGG CGACGATGCC GATGACCGTG CTCGGCGCCG GGGTGTTCCT GTCCGCCTAC
GCGACCCAGT GGGTCGGGCT GGACGCGATC TTCGGCGCGT TCGTCTTCGG CGCCGTGATG
CCGCGCGGCG CGACCGGCAC CCTGCGCACC CGCGTCCAGG AGCCGATGGA GCACGTCAAG
GTCCTGCTCA TGCCGATCTT CTTCATCATC ACCGGCCTGT CGATCGACGT CACCCAGCTC
GGCGGCAGCG GCGTGGCCGA GCTCGGCGCG ATCGTCGTCG TGGCCTGCGT CTGCAAGTTC
CTCGGCGCGG GGCTGCCGGC CCGTGCCTTC GGCATGTCCT GGCGCGATTC GAGCACCCTG
GGCCTGCTGA TGAACACCCG CGGCCTGACC GAGCTGATCA TCCTCAACGT CGGCCTGAAC
CTGGGAGTCC TGGACACCCG CATGTTCACC ATGATGGTGC TGATGGCCCT GGTCACCACC
GGAATGGCCG GACCGCTGGT CCCCAGGTTG CCCGATCTTC GAGCAGAGGA CGCCGTCAAG
CCCATGGCCG CCTCCGTCCG CGGCGTCTAG
 
Protein sequence
MPHHTPAMAV ALALAGAAVV MIVAAVLSVA GRRLRQPAVI AEIAAGICLG PSLLGLFGGD 
LPARLFPTDV RPLLSSMAEV GIVVFMFLVG WELDVSVIRG RRGLIGTVAL SAMALPFACG
VGLAAWLYAG HMTVGGHHVD RTAFILFVGV AMSITAFPVL ARIIVEHRLG GTEVGVIALA
SAAAGDMLAW GMLAVVTAVA AAQGQSGVTR VLVYSAIYLA AMFLIVKPLL RRLVAWLAAD
AREATMPMTV LGAGVFLSAY ATQWVGLDAI FGAFVFGAVM PRGATGTLRT RVQEPMEHVK
VLLMPIFFII TGLSIDVTQL GGSGVAELGA IVVVACVCKF LGAGLPARAF GMSWRDSSTL
GLLMNTRGLT ELIILNVGLN LGVLDTRMFT MMVLMALVTT GMAGPLVPRL PDLRAEDAVK
PMAASVRGV